Detailed information    

insolico Bioinformatically predicted

Overview


Name   rexA   Type   Machinery gene
Locus tag   I6H72_RS03145 Genome accession   NZ_CP066055
Coordinates   624843..628523 (-) Length   1226 a.a.
NCBI ID   WP_198458418.1    Uniprot ID   -
Organism   Streptococcus constellatus strain FDAARGOS_1015     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 619843..633523
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6H72_RS03130 (I6H72_03130) glgD 620188..621327 (-) 1140 WP_020997712.1 glucose-1-phosphate adenylyltransferase subunit GlgD -
  I6H72_RS03135 (I6H72_03135) - 621317..622459 (-) 1143 WP_003025294.1 glucose-1-phosphate adenylyltransferase -
  I6H72_RS03140 (I6H72_03140) glgB 622463..624373 (-) 1911 WP_198458278.1 1,4-alpha-glucan branching protein GlgB -
  I6H72_RS03145 (I6H72_03145) rexA 624843..628523 (-) 3681 WP_198458418.1 helicase-exonuclease AddAB subunit AddA Machinery gene
  I6H72_RS03150 (I6H72_03150) rexB 628520..631795 (-) 3276 WP_198458279.1 ATP-dependent nuclease subunit B Machinery gene
  I6H72_RS03155 (I6H72_03155) - 631916..633130 (-) 1215 WP_006267100.1 ABC transporter permease -

Sequence


Protein


Download         Length: 1226 a.a.        Molecular weight: 141513.48 Da        Isoelectric Point: 5.7010

>NTDB_id=453301 I6H72_RS03145 WP_198458418.1 624843..628523(-) (rexA) [Streptococcus constellatus strain FDAARGOS_1015]
MRQIPFLTQAEIRALQDQEVQSDKVQKRTPEQIEAIYSSGQNILVSASAGSGKTFVMVQRIIDQIMRGVRIEQLFISTFT
VKAASELKERLEKELSKALKETNDEELKQHLAQQLADIPNADIGTMDSFTQKVLNKYGYLLELAPNFRILQNASEQLLLQ
NEVFEQVFEDFYQSDQATLFKKLVKNFTGQRKDLLGFREQVYKIYSFLQSTSSPIEWLEKDFLKGYEFADFQEEKAQLLA
QTKEALFDLEDFFSYHLVHEAKEFPKARYLENVQRVLDDLASLQGQSSEEAYLTALNNIVEISRVSNGKALTNSGRKEEL
KEIINAYNEKRKEKIQVLRDLADQFYRFEFQLTYHEEAKEILLVLQQFMKLFVTSYLNRKKEENAFEFADISHFAIQILE
KCSDVRQFYRNKYHEVMVDEYQDTNHTQERMLELLSNGDNRFMVGDIKQSIYRFRQADSQIFNEKFKTYKEDSRQGKLIV
LKENFRSHLEVLEATNDVFKRLMDEEVGEIDYNETHYLVAGNPDKKEPNPLYQTEFLIYDGALEADKEENDKEVSSVSAG
EVELVIKEIIRLYNEENVQFEDITLLTASRTRNDVILAEFAKYGIPVVSDGGEDNYLQSVEVMVMLDTLRTINNPLNDYA
LVALLKSPMFNFTEDELARLALQKKVTETNYVVHQENLYEKLKNALNGYGQYPELITPPLLKKIQQFQGTLQAWREYAKT
NSLYDLLWKIYQDRFYYDYVGALPNGAGRQANLYALTLRANDYEKMSFKGLSRFIGMIDKILETQNDLASVVSAAPKHAV
RLMTVHKSKGLEFKYVFLLNMDKVFNRKDSSSALILSRQNGVGIKYVADVAVDVADKLAPNHVRLSIDTLPYEQNEREIH
LASISEQMRLLYVAMTRAERKLYLVGKGHQNSLEKKSFPTPVKGHLAASIRQSMTSFQDWMWTLHVVFEKDNLAFSTRFV
TDSDLTSEKIGQLKLKHAVIEEDLIDNRQSEDIRRALDILENVDRLNTKYQAAIRLPSVRTPSQIKKFYEPIMDTDGVEI
MEKRNPTIVGKASFELPNFAKKAPVTGAQIGSAVHELMQRIPLVQAPTIAILRKVLKQVQAEESVKKKIDLQKIASFFGT
ELGQLLLKHTDRVYREAPFAMLKQDPASGQYFVVRGILDGYLLLTDRIILFDYKTDRYTNPSELVERYQAQLALYAEALS
RSYSIEKVEKYLVLLGGAQLQVVKVE

Nucleotide


Download         Length: 3681 bp        

>NTDB_id=453301 I6H72_RS03145 WP_198458418.1 624843..628523(-) (rexA) [Streptococcus constellatus strain FDAARGOS_1015]
ATGAGACAAATTCCATTTTTGACTCAAGCAGAGATTCGTGCTTTGCAGGATCAGGAAGTTCAGTCTGACAAAGTTCAAAA
ACGTACACCAGAACAGATTGAAGCCATTTACTCTTCCGGTCAAAATATTCTGGTTTCTGCTTCTGCGGGATCAGGAAAAA
CCTTTGTTATGGTGCAGCGGATTATTGACCAAATTATGCGGGGAGTTCGTATTGAGCAGCTCTTCATTTCAACTTTCACC
GTCAAAGCAGCTAGTGAATTAAAAGAGCGCTTGGAGAAAGAGCTGTCCAAGGCTTTGAAAGAAACAAATGATGAGGAATT
AAAACAACACTTGGCTCAGCAATTAGCCGATATTCCGAATGCAGATATTGGAACCATGGACTCTTTTACCCAAAAAGTCC
TGAATAAATATGGTTATCTATTGGAATTGGCGCCAAATTTTCGCATTTTGCAAAATGCGAGTGAGCAGTTATTGCTACAA
AACGAAGTTTTTGAGCAAGTTTTTGAAGACTTCTATCAATCTGATCAGGCTACTTTGTTTAAAAAATTAGTCAAAAACTT
TACAGGTCAGAGAAAAGATTTGCTTGGTTTTCGCGAGCAGGTTTATAAGATTTATTCTTTCTTGCAGTCTACTAGTAGTC
CAATAGAATGGTTGGAAAAAGACTTTTTGAAAGGCTATGAGTTTGCAGATTTCCAAGAAGAAAAAGCGCAACTTTTAGCA
CAAACAAAAGAAGCCCTCTTTGATTTAGAAGATTTTTTTAGCTATCATTTGGTTCATGAAGCCAAGGAATTTCCCAAAGC
AAGATATCTTGAAAATGTGCAGCGTGTGCTTGATGACCTGGCAAGCTTACAAGGACAATCCTCTGAGGAAGCCTATCTCA
CAGCGCTCAATAACATTGTAGAAATATCGCGGGTCAGCAATGGGAAAGCCTTGACGAACAGCGGACGAAAAGAAGAATTA
AAAGAAATTATCAACGCCTATAACGAAAAACGCAAAGAAAAAATTCAAGTTTTACGAGACTTGGCAGATCAATTTTATCG
TTTTGAATTTCAATTGACCTACCATGAGGAAGCAAAAGAAATTTTACTTGTTTTGCAACAATTTATGAAATTGTTTGTTA
CAAGCTATTTGAATCGCAAAAAAGAAGAAAATGCTTTTGAATTTGCGGACATTAGTCATTTTGCTATTCAGATCTTAGAA
AAATGTTCGGATGTGCGTCAGTTTTATAGGAACAAATACCATGAAGTTATGGTAGATGAATATCAAGATACTAACCACAC
GCAAGAGCGGATGCTAGAACTGTTATCAAATGGGGATAATCGCTTTATGGTGGGGGATATTAAACAGTCTATTTACCGTT
TTCGTCAAGCGGATTCGCAGATTTTCAATGAGAAATTCAAAACCTATAAAGAAGATAGCAGACAAGGAAAATTGATTGTT
TTAAAAGAGAATTTTCGCAGTCATTTGGAAGTCTTGGAAGCCACCAATGATGTGTTTAAGCGCCTCATGGATGAGGAAGT
GGGAGAAATTGATTACAATGAAACGCATTATCTGGTCGCTGGAAATCCTGATAAAAAAGAACCAAATCCCTTGTATCAGA
CAGAATTTCTCATTTATGATGGAGCGCTTGAAGCGGATAAGGAGGAGAATGACAAGGAGGTTTCTTCTGTTTCTGCAGGA
GAAGTAGAACTGGTAATTAAAGAAATTATTCGCCTGTACAATGAAGAAAATGTCCAATTTGAGGATATTACTTTGCTAAC
GGCTTCGCGGACGCGCAACGATGTGATTTTAGCTGAATTTGCTAAATATGGTATTCCTGTCGTTTCAGACGGTGGTGAGG
ACAATTACCTTCAGTCTGTTGAAGTCATGGTGATGTTAGACACCTTGCGTACAATTAACAACCCTCTCAATGATTATGCT
TTAGTGGCGCTTTTAAAATCGCCAATGTTTAACTTTACAGAAGATGAATTGGCACGTTTAGCTTTGCAAAAGAAGGTGAC
TGAGACAAATTATGTTGTCCATCAGGAAAATCTCTATGAGAAGTTGAAGAATGCTCTGAATGGGTACGGGCAATATCCTG
AACTTATCACGCCTCCTCTTTTAAAAAAAATCCAGCAATTTCAAGGAACACTACAGGCTTGGCGAGAGTATGCAAAAACA
AATTCACTATATGATTTGCTTTGGAAAATTTATCAAGATCGCTTTTATTACGATTATGTGGGAGCTTTACCAAATGGAGC
GGGACGTCAAGCTAATCTCTATGCCCTTACTTTGCGCGCAAATGATTACGAAAAAATGAGTTTTAAAGGCTTGTCACGTT
TTATCGGGATGATTGATAAAATCTTGGAAACACAGAATGATTTAGCTAGTGTAGTTAGTGCAGCTCCGAAACATGCGGTT
CGCCTGATGACGGTTCATAAGAGCAAAGGTTTGGAATTTAAATATGTCTTTTTGCTCAATATGGACAAAGTATTTAATCG
TAAAGATAGCAGTTCCGCTTTGATTCTCAGTCGTCAAAATGGTGTTGGAATCAAGTATGTGGCTGATGTAGCAGTAGATG
TTGCTGATAAGTTAGCTCCAAACCATGTTCGTTTGTCTATTGATACTCTGCCTTATGAGCAAAATGAACGTGAGATTCAT
TTAGCCAGCATTTCGGAACAAATGCGTCTACTCTATGTCGCCATGACACGCGCTGAAAGGAAACTGTATTTAGTTGGTAA
AGGTCATCAGAACAGTTTGGAGAAAAAAAGCTTCCCTACTCCAGTGAAGGGGCATTTAGCTGCATCTATCAGGCAAAGTA
TGACAAGTTTTCAAGATTGGATGTGGACTTTACATGTAGTATTTGAGAAAGATAATCTAGCTTTTTCAACGCGATTTGTG
ACAGATAGTGACTTGACAAGTGAAAAAATAGGTCAACTGAAATTGAAACATGCGGTTATTGAAGAGGATTTAATAGACAA
TCGCCAATCTGAGGATATTCGTAGGGCTTTGGATATTTTGGAAAATGTAGATCGACTGAATACCAAGTATCAAGCTGCCA
TCCGTTTACCGAGTGTTCGAACACCGAGTCAAATTAAGAAATTTTATGAACCGATTATGGATACAGACGGCGTTGAAATT
ATGGAGAAAAGGAATCCGACCATTGTAGGAAAAGCTTCTTTTGAGCTACCAAATTTTGCTAAAAAAGCTCCAGTTACAGG
AGCGCAAATCGGTAGCGCTGTCCATGAACTGATGCAGCGTATTCCTTTGGTTCAAGCCCCTACGATAGCTATTTTGAGAA
AAGTTTTAAAACAGGTTCAGGCAGAAGAAAGTGTTAAAAAGAAAATTGATTTGCAAAAGATAGCTAGTTTTTTTGGGACT
GAACTTGGGCAGCTCCTTTTGAAGCATACAGACAGAGTATATCGTGAAGCTCCTTTTGCTATGTTAAAGCAGGATCCAGC
AAGTGGACAATATTTTGTAGTCCGTGGGATTCTGGACGGTTATCTACTGCTGACGGACCGAATCATTCTCTTTGATTACA
AGACGGATCGATATACAAATCCAAGTGAATTAGTGGAGCGCTACCAAGCACAATTAGCACTTTATGCTGAAGCTCTTAGT
CGTTCATACAGTATTGAAAAAGTTGAAAAATACTTAGTGTTGTTAGGCGGAGCACAGCTTCAAGTGGTGAAAGTAGAATA
G


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rexA Streptococcus pneumoniae R6

60.408

99.918

0.604