Detailed information    

insolico Bioinformatically predicted

Overview


Name   hexA   Type   Machinery gene
Locus tag   I6I32_RS06120 Genome accession   NZ_CP066041
Coordinates   1258474..1261008 (+) Length   844 a.a.
NCBI ID   WP_198464304.1    Uniprot ID   -
Organism   Streptococcus oralis strain FDAARGOS_1075     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context


Location: 1253474..1266008
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6I32_RS06095 (I6I32_06095) nrdI 1253540..1254010 (+) 471 WP_000724244.1 class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI -
  I6I32_RS06100 (I6I32_06100) - 1254090..1255352 (-) 1263 WP_198464302.1 NRAMP family divalent metal transporter -
  I6I32_RS06105 (I6I32_06105) - 1255551..1255796 (-) 246 WP_198464303.1 MarR family transcriptional regulator -
  I6I32_RS06110 (I6I32_06110) argS 1256131..1257822 (-) 1692 WP_125384809.1 arginine--tRNA ligase -
  I6I32_RS06115 (I6I32_06115) argR 1257977..1258423 (+) 447 WP_001231483.1 arginine repressor -
  I6I32_RS06120 (I6I32_06120) hexA 1258474..1261008 (+) 2535 WP_198464304.1 DNA mismatch repair protein MutS Machinery gene
  I6I32_RS06125 (I6I32_06125) - 1261049..1261507 (-) 459 WP_198464305.1 DUF3021 domain-containing protein -
  I6I32_RS06130 (I6I32_06130) - 1261504..1261944 (-) 441 WP_198464306.1 LytTR family DNA-binding domain-containing protein -
  I6I32_RS06135 (I6I32_06135) hexB 1262258..1264207 (+) 1950 WP_198464307.1 DNA mismatch repair endonuclease MutL Machinery gene
  I6I32_RS06140 (I6I32_06140) - 1264361..1264858 (-) 498 WP_198464308.1 helix-turn-helix domain-containing protein -

Sequence


Protein


Download         Length: 844 a.a.        Molecular weight: 94623.12 Da        Isoelectric Point: 4.8531

>NTDB_id=453246 I6I32_RS06120 WP_198464304.1 1258474..1261008(+) (hexA) [Streptococcus oralis strain FDAARGOS_1075]
MATEKLSPGMQQYVDIKKQYPDAFLLFRMGDFYELFYEDAINAAQILEISLTSRNKNAENPIPMAGVPYHSAQQYIDVLI
EQGYKVAIAEQMEDPKQAVGVVKREVVQVITPGTVVDSSKPDSQNNFLVSLDCDGNQFGLAYMDLVTGDFYVTGLLYFTL
VCGEIRNLKAREVVLGYDLSEEEEQILSRQMNLVLSYEKEGFEDIHLLDPRLAAVEQAAASKLLQYVHRTQMRELNHLKP
VIYYEIKDFLQMDYATKASLDLVENARSGKKQGSLFWLLDETKTAMGMRLLRSWIHRPLIDKERIVQRQEVVQVFLDHFF
ERSDLTDSLKGVYDIERLASRVSFGKTNPKDLLQLATTLSSVPRIRAILEGMEQPALAYLIAQLDAIPELESLISAAIAP
EAPHVITEGGIIRTGFDETLDKYRRVLREGTSWIAEIEAKERENSGISTLKIDYNKKDGYYFHVTNSQLGNVPAHFFRKA
TLKNSERFGTEELARIEGDMLEAREKSANLEYEIFMRIREEVSKYIQRLQALAQGIATIDVLQSLAVVAETQHLIRPEFG
EDSQIDIQKGRHAVVEKVMGAQTYIPNTIQMAEDTSIQLITGPNMSGKSTYMRQLAMTAVMAQLGSYVPAESAHLPIFDA
IFTRIGAADDLVSGQSTFMVEMMEANNAISHATKDSLILFDELGRGTATYDGMALAQSIIEYIHEHIGAKTLFATHYHEL
TSLESSLKNLVNVHVATLEQDGQVTFLHKIEPGPADKSYGIHVAKIAGLPAELLARADKILTQLENQGTESPAPMRETSA
VTEQMSLFDAPAEHPILAELAKLDVYNMTPMQAMNVLAELKQKL

Nucleotide


Download         Length: 2535 bp        

>NTDB_id=453246 I6I32_RS06120 WP_198464304.1 1258474..1261008(+) (hexA) [Streptococcus oralis strain FDAARGOS_1075]
ATGGCAACAGAAAAGCTATCACCCGGCATGCAACAGTATGTGGATATTAAAAAACAATACCCAGATGCTTTTTTGCTTTT
TCGGATGGGTGATTTTTACGAGTTGTTCTATGAAGATGCAATTAATGCAGCGCAAATTTTAGAAATTTCCTTAACAAGTC
GGAATAAAAATGCAGAAAATCCGATACCCATGGCGGGCGTCCCCTATCATTCTGCCCAACAGTATATCGATGTTCTGATT
GAGCAGGGCTATAAAGTTGCCATTGCCGAACAGATGGAAGATCCCAAACAAGCGGTTGGTGTTGTCAAGCGAGAGGTGGT
CCAGGTCATCACACCTGGAACGGTCGTTGATAGCAGTAAGCCGGATAGTCAGAATAATTTCTTGGTTTCCTTAGATTGTG
ATGGCAATCAATTTGGTCTGGCTTATATGGATTTGGTGACGGGTGACTTTTATGTGACGGGGCTATTGTATTTCACGTTG
GTTTGTGGGGAAATCCGTAACCTAAAGGCGCGAGAAGTGGTGCTGGGTTATGACTTGTCTGAGGAAGAAGAACAAATCCT
CAGCCGTCAGATGAATCTGGTGCTTTCTTATGAGAAGGAAGGCTTTGAGGATATTCATTTACTGGATCCACGACTGGCAG
CTGTGGAGCAAGCGGCAGCTAGTAAGCTCCTCCAGTATGTTCACCGTACCCAGATGCGAGAATTGAACCATCTCAAACCA
GTTATCTACTATGAAATTAAAGATTTCTTGCAGATGGATTATGCGACCAAGGCTAGTCTGGATTTGGTTGAGAATGCCCG
TTCAGGCAAGAAGCAGGGGAGTCTTTTCTGGCTTTTGGATGAAACCAAAACAGCTATGGGCATGCGGCTCTTGCGCTCTT
GGATCCATCGTCCCTTGATTGATAAGGAACGAATCGTCCAACGTCAAGAGGTGGTGCAGGTCTTTCTTGACCACTTCTTT
GAGCGTAGTGATTTGACAGACAGTCTCAAGGGTGTTTATGACATCGAACGTTTGGCTAGTCGGGTTTCTTTTGGCAAGAC
CAATCCAAAGGATCTCTTGCAACTGGCGACTACCTTATCTAGTGTGCCACGGATTCGAGCGATTTTAGAAGGGATGGAGC
AGCCTGCTCTAGCCTATCTCATCGCACAGCTGGATGCCATTCCGGAGTTGGAGAGCTTGATTAGTGCTGCCATTGCTCCT
GAAGCTCCTCACGTGATTACGGAAGGTGGCATTATCCGTACGGGATTTGATGAGACCTTAGACAAGTACCGTCGTGTGCT
CAGAGAAGGGACTAGCTGGATTGCTGAGATTGAGGCTAAGGAGAGAGAAAACTCTGGCATCAGTACGCTCAAGATCGACT
ACAATAAAAAAGATGGTTACTATTTCCATGTGACTAATTCGCAACTGGGAAATGTTCCAGCCCACTTTTTCCGCAAGGCA
ACACTGAAAAACTCGGAACGCTTTGGGACAGAGGAGTTAGCCCGTATCGAGGGAGATATGCTGGAGGCGCGTGAGAAGTC
AGCCAACCTAGAATATGAAATCTTTATGCGTATCCGTGAGGAAGTCAGCAAGTACATCCAGCGTTTGCAGGCTTTAGCAC
AAGGAATTGCGACGATTGATGTTTTGCAAAGTCTGGCGGTTGTAGCTGAAACCCAGCATTTGATTCGACCTGAGTTTGGA
GAAGATTCACAAATAGATATCCAAAAAGGGCGCCATGCTGTCGTCGAAAAGGTCATGGGAGCTCAGACCTATATTCCTAA
TACTATTCAGATGGCAGAAGATACGAGTATTCAGCTAATCACAGGGCCCAACATGAGTGGGAAGTCTACCTACATGCGCC
AGTTAGCTATGACGGCGGTTATGGCCCAGCTAGGCTCGTATGTGCCGGCAGAAAGCGCCCATTTGCCTATCTTCGATGCT
ATCTTTACCCGTATCGGAGCAGCAGATGACTTGGTTTCAGGTCAATCAACCTTTATGGTGGAGATGATGGAGGCTAACAA
TGCCATTTCTCATGCGACCAAGGATTCCTTGATTCTCTTTGATGAATTGGGACGAGGAACTGCAACATATGACGGAATGG
CTCTTGCTCAGTCCATCATCGAATACATCCATGAACATATCGGAGCCAAAACCCTCTTTGCGACCCACTACCATGAGTTG
ACCAGTCTGGAGTCCAGCTTGAAAAACTTGGTCAATGTCCATGTGGCGACCTTGGAGCAGGATGGGCAGGTGACCTTCCT
TCATAAGATCGAACCAGGACCAGCTGACAAATCCTACGGTATCCATGTTGCTAAGATTGCTGGCTTACCAGCAGAACTTT
TAGCAAGGGCGGATAAGATATTGACTCAACTGGAGAATCAAGGGACGGAAAGTCCTGCTCCAATGAGAGAAACAAGTGCT
GTTACTGAACAGATGTCACTCTTTGACGCGCCTGCAGAGCATCCTATCCTAGCAGAATTAGCTAAACTGGATGTGTACAA
TATGACACCGATGCAGGCTATGAACGTCTTGGCCGAGCTCAAACAAAAGTTATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  hexA Streptococcus pneumoniae R6

95.972

100

0.96

  mutS Pseudomonas stutzeri strain ATCC 17587

37.063

100

0.377