Detailed information
Bioinformatically predicted
Overview
| Name | recA | Type | Machinery gene |
| Locus tag | HUE48_RS06005 | Genome accession | NZ_CP054499 |
| Coordinates | 1359884..1360888 (+) | Length | 334 a.a. |
| NCBI ID | WP_014166107.1 | Uniprot ID | G8X517 |
| Organism | Flavobacterium columnare strain F2R68 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 1354884..1365888
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HUE48_RS05975 (HUE48_05975) | - | 1354984..1355688 (+) | 705 | WP_014166113.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| HUE48_RS05980 (HUE48_05980) | hppD | 1355769..1356932 (-) | 1164 | WP_014166112.1 | 4-hydroxyphenylpyruvate dioxygenase | - |
| HUE48_RS05985 (HUE48_05985) | - | 1357042..1358199 (-) | 1158 | WP_014166111.1 | homogentisate 1,2-dioxygenase | - |
| HUE48_RS05990 (HUE48_05990) | - | 1358392..1358817 (-) | 426 | WP_014166110.1 | hypothetical protein | - |
| HUE48_RS05995 (HUE48_05995) | greA | 1358974..1359450 (+) | 477 | WP_014166109.1 | transcription elongation factor GreA | - |
| HUE48_RS06000 (HUE48_06000) | - | 1359467..1359856 (+) | 390 | WP_014166108.1 | HIT family protein | - |
| HUE48_RS06005 (HUE48_06005) | recA | 1359884..1360888 (+) | 1005 | WP_014166107.1 | recombinase RecA | Machinery gene |
| HUE48_RS06010 (HUE48_06010) | bioB | 1361185..1362267 (-) | 1083 | WP_014166105.1 | biotin synthase BioB | - |
| HUE48_RS06015 (HUE48_06015) | - | 1362374..1363354 (-) | 981 | WP_196771913.1 | porin | - |
| HUE48_RS06020 (HUE48_06020) | aqpZ | 1363682..1364359 (-) | 678 | WP_014166103.1 | aquaporin Z | - |
| HUE48_RS06025 (HUE48_06025) | - | 1364602..1365522 (-) | 921 | WP_014166102.1 | bifunctional riboflavin kinase/FAD synthetase | - |
Sequence
Protein
Download Length: 334 a.a. Molecular weight: 36188.57 Da Isoelectric Point: 5.3576
>NTDB_id=452967 HUE48_RS06005 WP_014166107.1 1359884..1360888(+) (recA) [Flavobacterium columnare strain F2R68]
MSSEKEAKLKALQLTLDKLDKAYGKGTVMKMGDKAIEEVEVISSGSLGVDLALGVGGYPKGRIIEIFGPESSGKTTLTLH
AIAEAQKAGGIAAFIDAEHAFDRFYAEKLGIDIDNLIISQPDNGEQALEIAESLIRSGAVDIVVIDSVAALTPKSEIEGD
MGDSKMGLHARLMSQALRKLTATISKTNCTVFFINQLRDKIGVMFGNPETTTGGNALKFYASVRLDIRRSSQIKDGENVL
GNRTKVKIVKNKVAPPFKTAEFDIMYGEGVSKTGEILDLAVEFEVIKKSGSWFSYGETKLGQGRDSVKSLIKDNPELAEE
LEIKIKELIKNLEN
MSSEKEAKLKALQLTLDKLDKAYGKGTVMKMGDKAIEEVEVISSGSLGVDLALGVGGYPKGRIIEIFGPESSGKTTLTLH
AIAEAQKAGGIAAFIDAEHAFDRFYAEKLGIDIDNLIISQPDNGEQALEIAESLIRSGAVDIVVIDSVAALTPKSEIEGD
MGDSKMGLHARLMSQALRKLTATISKTNCTVFFINQLRDKIGVMFGNPETTTGGNALKFYASVRLDIRRSSQIKDGENVL
GNRTKVKIVKNKVAPPFKTAEFDIMYGEGVSKTGEILDLAVEFEVIKKSGSWFSYGETKLGQGRDSVKSLIKDNPELAEE
LEIKIKELIKNLEN
Nucleotide
Download Length: 1005 bp
>NTDB_id=452967 HUE48_RS06005 WP_014166107.1 1359884..1360888(+) (recA) [Flavobacterium columnare strain F2R68]
ATGAGTTCAGAAAAAGAGGCTAAACTAAAAGCACTACAGCTTACTTTAGATAAGTTAGATAAAGCATACGGTAAAGGCAC
CGTGATGAAAATGGGAGACAAAGCAATAGAAGAAGTAGAAGTTATTTCTTCGGGGTCTCTTGGAGTAGATCTTGCATTAG
GTGTTGGCGGCTATCCTAAAGGTCGTATTATAGAAATATTTGGACCTGAATCATCAGGTAAGACAACACTTACATTACAT
GCGATTGCTGAGGCTCAAAAAGCAGGAGGAATTGCTGCTTTTATAGATGCTGAACACGCATTTGATCGTTTTTATGCAGA
AAAATTAGGAATAGACATTGACAACCTTATTATTTCACAACCTGACAATGGAGAACAAGCCTTAGAAATTGCTGAAAGTT
TAATTCGATCTGGAGCTGTAGATATTGTGGTTATAGACTCTGTTGCCGCACTTACTCCAAAGAGTGAAATTGAAGGCGAT
ATGGGCGATTCTAAGATGGGATTACACGCTCGTTTGATGTCACAAGCCCTACGTAAATTAACAGCAACTATTAGCAAAAC
GAATTGTACTGTATTTTTCATTAATCAGCTTCGCGATAAAATAGGTGTAATGTTTGGAAATCCTGAAACGACAACTGGAG
GTAATGCCCTTAAATTTTACGCATCGGTACGTTTAGATATTCGTCGTTCTTCACAAATTAAAGATGGTGAAAATGTATTA
GGCAATCGCACCAAAGTTAAAATTGTTAAGAATAAAGTAGCACCTCCTTTTAAAACAGCAGAATTTGACATTATGTATGG
CGAAGGTGTTTCTAAAACAGGAGAAATATTAGACCTAGCAGTTGAGTTTGAAGTTATCAAAAAGTCGGGATCATGGTTTA
GCTACGGAGAAACAAAACTCGGTCAAGGCCGTGACTCCGTTAAATCTTTAATAAAAGACAATCCTGAATTAGCAGAAGAG
CTAGAAATCAAAATCAAGGAATTAATTAAAAATTTAGAGAATTAG
ATGAGTTCAGAAAAAGAGGCTAAACTAAAAGCACTACAGCTTACTTTAGATAAGTTAGATAAAGCATACGGTAAAGGCAC
CGTGATGAAAATGGGAGACAAAGCAATAGAAGAAGTAGAAGTTATTTCTTCGGGGTCTCTTGGAGTAGATCTTGCATTAG
GTGTTGGCGGCTATCCTAAAGGTCGTATTATAGAAATATTTGGACCTGAATCATCAGGTAAGACAACACTTACATTACAT
GCGATTGCTGAGGCTCAAAAAGCAGGAGGAATTGCTGCTTTTATAGATGCTGAACACGCATTTGATCGTTTTTATGCAGA
AAAATTAGGAATAGACATTGACAACCTTATTATTTCACAACCTGACAATGGAGAACAAGCCTTAGAAATTGCTGAAAGTT
TAATTCGATCTGGAGCTGTAGATATTGTGGTTATAGACTCTGTTGCCGCACTTACTCCAAAGAGTGAAATTGAAGGCGAT
ATGGGCGATTCTAAGATGGGATTACACGCTCGTTTGATGTCACAAGCCCTACGTAAATTAACAGCAACTATTAGCAAAAC
GAATTGTACTGTATTTTTCATTAATCAGCTTCGCGATAAAATAGGTGTAATGTTTGGAAATCCTGAAACGACAACTGGAG
GTAATGCCCTTAAATTTTACGCATCGGTACGTTTAGATATTCGTCGTTCTTCACAAATTAAAGATGGTGAAAATGTATTA
GGCAATCGCACCAAAGTTAAAATTGTTAAGAATAAAGTAGCACCTCCTTTTAAAACAGCAGAATTTGACATTATGTATGG
CGAAGGTGTTTCTAAAACAGGAGAAATATTAGACCTAGCAGTTGAGTTTGAAGTTATCAAAAAGTCGGGATCATGGTTTA
GCTACGGAGAAACAAAACTCGGTCAAGGCCGTGACTCCGTTAAATCTTTAATAAAAGACAATCCTGAATTAGCAGAAGAG
CTAGAAATCAAAATCAAGGAATTAATTAAAAATTTAGAGAATTAG
Similar proteins
Only experimentally validated proteins are listed.