Detailed information NTG0452832

Bioinformatically predicted

Overview

• Name: cipB
• Type: Regulator
• Locus tag: I6H76_RS07020
• Genome accession: NZ_CP065994
• Coordinates: 1368927..1369160 (+)
• Length: 77 a.a.
• NCBI ID: WP_006531875.1
• Uniprot ID: A0ABM9XEM8
• Organism: Streptococcus infantarius strain FDAARGOS_1019
• Function: indirect induction of ComX; activation of comRS system (predicted from homology) Competence regulation

Genomic Context

Location: 1363927..1374160

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I6H76_RS06970 (I6H76_06970)	-	1364924..1365181 (+)	258	WP_006531864.1	bacteriocin class II family protein	-
I6H76_RS06975 (I6H76_06975)	-	1365199..1365393 (+)	195	WP_043878345.1	class IIb bacteriocin, lactobin A/cerein 7B family	-
I6H76_RS06980 (I6H76_06980)	cipB	1365589..1365816 (+)	228	WP_006531867.1	Blp family class II bacteriocin	Regulator
I6H76_RS06985 (I6H76_06985)	-	1365818..1366006 (+)	189	WP_115283782.1	class IIb bacteriocin, lactobin A/cerein 7B family	-
I6H76_RS06990 (I6H76_06990)	-	1366475..1366633 (+)	159	WP_006531869.1	ComC/BlpC family leader-containing pheromone/bacteriocin	-
I6H76_RS06995 (I6H76_06995)	-	1366661..1366816 (+)	156	WP_006531870.1	bacteriocin	-
I6H76_RS07000 (I6H76_07000)	-	1366856..1367530 (+)	675	WP_006531871.1	CPBP family intramembrane glutamic endopeptidase	-
I6H76_RS07005 (I6H76_07005)	-	1367871..1368173 (+)	303	WP_006531872.1	hypothetical protein	-
I6H76_RS07010 (I6H76_07010)	-	1368252..1368455 (+)	204	WP_081442276.1	garvicin Q family class II bacteriocin	-
I6H76_RS07015 (I6H76_07015)	-	1368467..1368769 (+)	303	WP_006531874.1	bacteriocin immunity protein	-
I6H76_RS07020 (I6H76_07020)	cipB	1368927..1369160 (+)	234	WP_006531875.1	Blp family class II bacteriocin	Regulator
I6H76_RS07025 (I6H76_07025)	-	1369180..1369368 (+)	189	WP_006531876.1	class IIb bacteriocin, lactobin A/cerein 7B family	-
I6H76_RS07030 (I6H76_07030)	-	1370118..1370336 (+)	219	WP_006531878.1	Blp family class II bacteriocin	-
I6H76_RS07035 (I6H76_07035)	-	1370336..1370632 (+)	297	WP_006531879.1	bacteriocin immunity protein	-
I6H76_RS07040 (I6H76_07040)	-	1370801..1371034 (+)	234	WP_006531880.1	Blp family class II bacteriocin	-
I6H76_RS07045 (I6H76_07045)	cipB	1371224..1371424 (+)	201	WP_006531882.1	bacteriocin class II family protein	Regulator
I6H76_RS07050 (I6H76_07050)	-	1371450..1371632 (+)	183	WP_006531883.1	Blp family class II bacteriocin	-
I6H76_RS07055 (I6H76_07055)	-	1372250..1372480 (+)	231	WP_043878356.1	bacteriocin	-
I6H76_RS07060 (I6H76_07060)	-	1372569..1372880 (+)	312	WP_003066586.1	hypothetical protein	-
I6H76_RS07065 (I6H76_07065)	-	1373094..1373186 (+)	93	Protein_1343	Blp family class II bacteriocin	-
I6H76_RS07070 (I6H76_07070)	-	1373244..1373648 (+)	405	WP_018364981.1	hypothetical protein	-

Sequence

Protein

• Length: 77 a.a.
• Molecular weight: 7530.65 Da
• Isoelectric Point: 4.6641

>NTDB_id=452832 I6H76_RS07020 WP_006531875.1 1368927..1369160(+) (cipB) [Streptococcus infantarius strain FDAARGOS_1019]
MNTKAFEQFDVMTDVELAKVEGGNKCVNAIFGGALTGAGSGFVGGMATLGVTSIPGAFVGAHFGAIAGGLYCVGASL

Nucleotide

• Length: 234 bp

>NTDB_id=452832 I6H76_RS07020 WP_006531875.1 1368927..1369160(+) (cipB) [Streptococcus infantarius strain FDAARGOS_1019]
ATGAATACAAAAGCATTTGAACAATTTGATGTAATGACAGACGTAGAACTTGCTAAAGTTGAAGGTGGAAACAAATGTGT
TAATGCAATTTTTGGTGGCGCATTAACAGGTGCAGGATCAGGATTTGTAGGTGGTATGGCAACGCTTGGTGTTACTTCAA
TTCCAGGAGCATTTGTTGGAGCCCATTTTGGAGCAATAGCTGGTGGCTTATATTGTGTAGGTGCTAGTCTTTGA

Domains

Predicted by InterProScan.

• Bacteriocin class II with double-glycine leader peptide (Bacteriocin_IIc) (6-63)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cipB	Streptococcus mutans UA159	50	75.325	0.377