Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | HT586_RS07675 | Genome accession | NZ_CP054482 |
| Coordinates | 1481399..1482367 (-) | Length | 322 a.a. |
| NCBI ID | WP_188017276.1 | Uniprot ID | A0AAE7Q585 |
| Organism | Macrococcoides bohemicum strain 19Msa422 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1476399..1487367
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HT586_RS07645 (HT586_07640) | gcvT | 1477051..1478136 (-) | 1086 | WP_203546562.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| HT586_RS07650 (HT586_07645) | - | 1478273..1478779 (-) | 507 | WP_188017279.1 | shikimate kinase | - |
| HT586_RS07655 (HT586_07650) | - | 1478960..1479406 (-) | 447 | WP_188017278.1 | competence type IV pilus minor pilin ComGF | - |
| HT586_RS07660 (HT586_07655) | - | 1479586..1480038 (-) | 453 | WP_203545536.1 | hypothetical protein | - |
| HT586_RS07665 (HT586_07660) | comGC | 1480004..1480363 (-) | 360 | WP_096076364.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| HT586_RS07670 (HT586_07665) | comGB | 1480375..1481412 (-) | 1038 | WP_203545537.1 | competence type IV pilus assembly protein ComGB | - |
| HT586_RS07675 (HT586_07670) | comGA | 1481399..1482367 (-) | 969 | WP_188017276.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| HT586_RS07680 (HT586_07675) | - | 1482577..1482825 (+) | 249 | WP_099578437.1 | DUF2626 domain-containing protein | - |
| HT586_RS07685 (HT586_07680) | - | 1482851..1483480 (-) | 630 | WP_133353337.1 | MBL fold metallo-hydrolase | - |
| HT586_RS07690 (HT586_07685) | - | 1483573..1483812 (+) | 240 | WP_188017275.1 | DUF2759 domain-containing protein | - |
| HT586_RS07695 (HT586_07690) | - | 1483849..1484160 (-) | 312 | WP_188017274.1 | MTH1187 family thiamine-binding protein | - |
| HT586_RS07700 (HT586_07695) | - | 1484160..1485131 (-) | 972 | WP_203545538.1 | ROK family glucokinase | - |
| HT586_RS07705 (HT586_07700) | - | 1485128..1485319 (-) | 192 | WP_096076356.1 | YqgQ family protein | - |
| HT586_RS07710 (HT586_07705) | - | 1485324..1486748 (-) | 1425 | WP_203545539.1 | rhomboid family intramembrane serine protease | - |
| HT586_RS07715 (HT586_07710) | - | 1486745..1487311 (-) | 567 | WP_203545540.1 | 5-formyltetrahydrofolate cyclo-ligase | - |
Sequence
Protein
Download Length: 322 a.a. Molecular weight: 36746.65 Da Isoelectric Point: 7.5532
>NTDB_id=452832 HT586_RS07675 WP_188017276.1 1481399..1482367(-) (comGA) [Macrococcoides bohemicum strain 19Msa422]
MEKLLHTILDDAIAKKTSDVHFIPEVKNVMMKFRIGGNMYAYNQLNTEDFEKLLSYVKFITHLDVSEKNKAQSGILTYQK
DKILYNIRASTLPHTIGQEACVMRIIPALFSQNISIEQELLSLMHKGSGLILISGPTGSGKSTLMYQMLNYAAQNLNKQI
ISIEDPVEQRIHGMIQINVNRKANITYQNAIKAILRCDPDIIMIGEIRDIETAKHVINASLSGHLVLSTLHANTCLGAIH
RLLEMGITKVELEQCVEIIINQRLVNTTSARTRIFEQLIKGDVRDYLNDRKVQHYHPLSEQLQVLYDKEKITQLEYERYA
LE
MEKLLHTILDDAIAKKTSDVHFIPEVKNVMMKFRIGGNMYAYNQLNTEDFEKLLSYVKFITHLDVSEKNKAQSGILTYQK
DKILYNIRASTLPHTIGQEACVMRIIPALFSQNISIEQELLSLMHKGSGLILISGPTGSGKSTLMYQMLNYAAQNLNKQI
ISIEDPVEQRIHGMIQINVNRKANITYQNAIKAILRCDPDIIMIGEIRDIETAKHVINASLSGHLVLSTLHANTCLGAIH
RLLEMGITKVELEQCVEIIINQRLVNTTSARTRIFEQLIKGDVRDYLNDRKVQHYHPLSEQLQVLYDKEKITQLEYERYA
LE
Nucleotide
Download Length: 969 bp
>NTDB_id=452832 HT586_RS07675 WP_188017276.1 1481399..1482367(-) (comGA) [Macrococcoides bohemicum strain 19Msa422]
ATGGAAAAACTATTACATACAATATTGGATGATGCAATTGCTAAAAAAACTTCAGATGTACACTTTATACCTGAAGTGAA
GAATGTCATGATGAAATTCAGGATTGGAGGTAATATGTATGCCTATAATCAGTTAAATACCGAAGACTTCGAAAAATTAT
TATCATATGTAAAATTTATAACACATCTTGATGTTTCTGAAAAAAATAAAGCGCAGAGCGGTATACTGACCTATCAGAAG
GACAAAATACTTTATAATATCAGGGCATCTACATTACCACATACGATTGGACAGGAAGCATGTGTGATGCGAATAATTCC
AGCTTTATTTAGTCAAAATATTTCGATTGAACAGGAATTATTATCTTTGATGCATAAAGGAAGCGGATTAATTCTAATTA
GTGGTCCTACTGGAAGCGGCAAAAGTACTTTAATGTACCAAATGTTAAATTATGCTGCACAAAATTTAAATAAACAGATT
ATATCGATTGAAGATCCTGTTGAACAGAGAATTCATGGTATGATTCAAATCAATGTGAATAGAAAAGCTAATATAACATA
TCAGAATGCAATAAAGGCTATTCTTCGCTGTGATCCGGATATTATTATGATAGGAGAGATCCGTGATATAGAAACTGCAA
AACATGTCATCAATGCAAGTTTAAGTGGTCATCTTGTGCTGTCGACACTTCATGCAAATACATGTCTTGGCGCTATCCAT
CGATTGCTGGAAATGGGAATAACAAAAGTTGAACTTGAACAGTGTGTAGAAATAATCATTAATCAGCGATTAGTTAATAC
TACATCAGCGCGAACACGTATTTTTGAACAGTTGATTAAAGGCGATGTACGGGATTATTTAAATGATAGAAAGGTTCAGC
ATTATCATCCTTTATCTGAACAATTGCAAGTTTTGTACGACAAAGAAAAGATTACGCAGCTGGAGTATGAACGTTATGCT
TTGGAATAG
ATGGAAAAACTATTACATACAATATTGGATGATGCAATTGCTAAAAAAACTTCAGATGTACACTTTATACCTGAAGTGAA
GAATGTCATGATGAAATTCAGGATTGGAGGTAATATGTATGCCTATAATCAGTTAAATACCGAAGACTTCGAAAAATTAT
TATCATATGTAAAATTTATAACACATCTTGATGTTTCTGAAAAAAATAAAGCGCAGAGCGGTATACTGACCTATCAGAAG
GACAAAATACTTTATAATATCAGGGCATCTACATTACCACATACGATTGGACAGGAAGCATGTGTGATGCGAATAATTCC
AGCTTTATTTAGTCAAAATATTTCGATTGAACAGGAATTATTATCTTTGATGCATAAAGGAAGCGGATTAATTCTAATTA
GTGGTCCTACTGGAAGCGGCAAAAGTACTTTAATGTACCAAATGTTAAATTATGCTGCACAAAATTTAAATAAACAGATT
ATATCGATTGAAGATCCTGTTGAACAGAGAATTCATGGTATGATTCAAATCAATGTGAATAGAAAAGCTAATATAACATA
TCAGAATGCAATAAAGGCTATTCTTCGCTGTGATCCGGATATTATTATGATAGGAGAGATCCGTGATATAGAAACTGCAA
AACATGTCATCAATGCAAGTTTAAGTGGTCATCTTGTGCTGTCGACACTTCATGCAAATACATGTCTTGGCGCTATCCAT
CGATTGCTGGAAATGGGAATAACAAAAGTTGAACTTGAACAGTGTGTAGAAATAATCATTAATCAGCGATTAGTTAATAC
TACATCAGCGCGAACACGTATTTTTGAACAGTTGATTAAAGGCGATGTACGGGATTATTTAAATGATAGAAAGGTTCAGC
ATTATCATCCTTTATCTGAACAATTGCAAGTTTTGTACGACAAAGAAAAGATTACGCAGCTGGAGTATGAACGTTATGCT
TTGGAATAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Staphylococcus aureus MW2 |
53.055 |
96.584 |
0.512 |
| comGA | Staphylococcus aureus N315 |
53.055 |
96.584 |
0.512 |