Detailed information NTG0452821

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: I6H76_RS05870
• Genome accession: NZ_CP065994
• Coordinates: 1131526..1132620 (-)
• Length: 364 a.a.
• NCBI ID: WP_006531476.1
• Uniprot ID: A0ABP2DJ46
• Organism: Streptococcus infantarius strain FDAARGOS_1019
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1126526..1137620

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I6H76_RS05855 (I6H76_05855)	trpS	1127620..1128642 (+)	1023	WP_006531479.1	tryptophan--tRNA ligase	-
I6H76_RS05860 (I6H76_05860)	guaB	1128866..1130347 (+)	1482	WP_015695840.1	IMP dehydrogenase	-
I6H76_RS05865 (I6H76_05865)	-	1130594..1131460 (+)	867	WP_006531477.1	GRP family sugar transporter	-
I6H76_RS05870 (I6H76_05870)	recF	1131526..1132620 (-)	1095	WP_006531476.1	DNA replication/repair protein RecF	Machinery gene
I6H76_RS05875 (I6H76_05875)	yaaA	1132623..1133006 (-)	384	WP_015695838.1	S4 domain-containing protein YaaA	-
I6H76_RS05880 (I6H76_05880)	yfmF	1133093..1134337 (+)	1245	WP_006531474.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
I6H76_RS05885 (I6H76_05885)	yfmH	1134338..1135627 (+)	1290	WP_006531473.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
I6H76_RS05890 (I6H76_05890)	-	1135693..1136631 (+)	939	WP_006531472.1	helix-turn-helix domain-containing protein	-
I6H76_RS05895 (I6H76_05895)	pgsA	1136644..1137198 (+)	555	WP_006531471.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-

Sequence

Protein

• Length: 364 a.a.
• Molecular weight: 42090.38 Da
• Isoelectric Point: 8.8954

>NTDB_id=452821 I6H76_RS05870 WP_006531476.1 1131526..1132620(-) (recF) [Streptococcus infantarius strain FDAARGOS_1019]
MWIQKIALKNYRNYLTNELEFSPRLNVFIGKNAQGKTNFLEAIYFLSLTRSHRTRSDKELIHFQEKELRVSGILQRSSGT
VPLEINLSSKGRVTKVNHLKQAKLSDYIGVMTVVLFAPEDLQLIKGAPSLRRKFIDIDLGQIKPVYLSDLSNYNHVLKQR
NTYLKTAEKVDIDFLAVLDEQLADFGSRVMEHRLDFVSNLEKAADRYHYAISNGLEHFKIRYLSSVPFQEKSEIKEYFLK
TLEKNRKRDIFKKNTGAGPHRDDLEFFINDMPANFGSQGQHRSLILSLKMAEIELIKNVTGDFPILLLDDVMSELDNYRQ
TELLKMIIAENVQTFITTTSLEHLSKLPEELKIFTVNQGTIEEN

Nucleotide

• Length: 1095 bp

>NTDB_id=452821 I6H76_RS05870 WP_006531476.1 1131526..1132620(-) (recF) [Streptococcus infantarius strain FDAARGOS_1019]
ATGTGGATTCAAAAAATAGCCTTAAAAAATTATCGCAATTATTTAACCAATGAGCTTGAATTTTCTCCCAGGCTAAATGT
CTTTATCGGGAAAAATGCTCAAGGAAAAACAAATTTCTTAGAAGCTATTTATTTCTTATCTTTAACACGTAGCCACCGCA
CACGTTCCGATAAAGAGCTGATTCACTTTCAAGAAAAAGAACTCCGCGTCTCAGGTATTCTGCAACGCTCAAGTGGGACA
GTTCCTTTGGAAATCAATCTATCAAGTAAAGGACGAGTCACTAAAGTTAATCACCTCAAACAAGCGAAATTATCTGACTA
TATCGGAGTGATGACAGTCGTCTTATTTGCACCTGAGGATTTACAACTTATCAAAGGAGCACCTAGTCTCCGTCGCAAGT
TTATTGACATTGATTTAGGGCAAATCAAGCCGGTCTACCTCTCTGATTTGTCTAATTACAATCATGTTCTTAAACAACGT
AACACTTACCTAAAAACCGCTGAAAAAGTTGACATCGACTTTTTAGCAGTCCTTGATGAGCAATTAGCTGATTTTGGTAG
CCGCGTCATGGAACATCGCTTAGATTTCGTCTCTAATCTCGAAAAAGCAGCCGACCGCTATCACTATGCCATCTCTAATG
GCCTAGAACATTTTAAAATTCGCTATCTATCATCTGTGCCATTCCAAGAAAAAAGCGAAATCAAAGAATACTTCTTAAAA
ACATTGGAAAAGAATCGCAAACGTGATATCTTCAAAAAAAATACTGGCGCTGGACCTCATCGTGATGATTTAGAATTTTT
CATCAACGATATGCCTGCCAATTTTGGTAGCCAAGGACAACACCGAAGTTTGATTTTATCTCTTAAAATGGCTGAAATTG
AACTCATTAAGAATGTTACTGGTGATTTTCCAATTCTACTTCTCGATGATGTCATGAGTGAACTAGATAACTACCGACAA
ACAGAATTGTTAAAAATGATTATTGCTGAAAATGTTCAAACCTTTATCACAACGACAAGTCTTGAACACCTTTCAAAACT
TCCAGAAGAGTTGAAAATTTTCACTGTTAATCAAGGAACTATTGAAGAAAACTAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-361)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	64.56	100	0.646
recF	Bacillus subtilis subsp. subtilis str. 168	44.444	100	0.451