Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   HT132_RS14950 Genome accession   NZ_CP054479
Coordinates   3062533..3062724 (-) Length   63 a.a.
NCBI ID   WP_003155061.1    Uniprot ID   A0AAE2TKK9
Organism   Bacillus amyloliquefaciens strain R8-25     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 3057533..3067724
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HT132_RS14925 (HT132_14925) - 3057890..3058876 (-) 987 WP_025284553.1 ABC transporter ATP-binding protein -
  HT132_RS14930 (HT132_14930) - 3059050..3059835 (-) 786 WP_017417447.1 DUF2268 domain-containing protein -
  HT132_RS14935 (HT132_14935) fabF 3059919..3061157 (-) 1239 WP_025649581.1 beta-ketoacyl-ACP synthase II -
  HT132_RS14940 (HT132_14940) - 3061180..3062118 (-) 939 WP_007409122.1 beta-ketoacyl-ACP synthase III -
  HT132_RS14945 (HT132_14945) - 3062286..3062504 (+) 219 WP_007409123.1 hypothetical protein -
  HT132_RS14950 (HT132_14950) comZ 3062533..3062724 (-) 192 WP_003155061.1 ComZ family protein Regulator
  HT132_RS14955 (HT132_14955) med 3062737..3063690 (-) 954 WP_174532619.1 BMP family ABC transporter substrate-binding protein Regulator
  HT132_RS14960 (HT132_14960) - 3063781..3064347 (-) 567 WP_110124641.1 hypothetical protein -
  HT132_RS14965 (HT132_14965) - 3064430..3065164 (-) 735 WP_174532620.1 hypothetical protein -
  HT132_RS14970 (HT132_14970) - 3065425..3065610 (+) 186 WP_007409129.1 YjzD family protein -
  HT132_RS14975 (HT132_14975) - 3065647..3065826 (-) 180 WP_003155070.1 YjzC family protein -
  HT132_RS14980 (HT132_14980) argF 3065901..3066872 (-) 972 WP_095060854.1 ornithine carbamoyltransferase -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7203.33 Da        Isoelectric Point: 4.2259

>NTDB_id=452798 HT132_RS14950 WP_003155061.1 3062533..3062724(-) (comZ) [Bacillus amyloliquefaciens strain R8-25]
MQHEKSLEFMQIAMKYLPEAKAELEKSGIDLSMEMIQPFMDLFTSVMAEAYELGRSDAGELNK

Nucleotide


Download         Length: 192 bp        

>NTDB_id=452798 HT132_RS14950 WP_003155061.1 3062533..3062724(-) (comZ) [Bacillus amyloliquefaciens strain R8-25]
ATGCAGCATGAAAAGTCTCTTGAATTTATGCAGATCGCGATGAAATACCTGCCGGAAGCAAAGGCGGAGCTTGAGAAATC
CGGCATAGATCTGTCTATGGAAATGATTCAGCCGTTTATGGACCTGTTTACATCGGTCATGGCGGAAGCGTATGAGCTTG
GCAGATCTGATGCCGGGGAGCTGAATAAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

86.207

92.063

0.794