Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptB   Type   Regulator
Locus tag   I6H76_RS03835 Genome accession   NZ_CP065994
Coordinates   763586..764620 (-) Length   344 a.a.
NCBI ID   WP_014334331.1    Uniprot ID   -
Organism   Streptococcus infantarius strain FDAARGOS_1019     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 758586..769620
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6H76_RS03800 (I6H76_03800) - 759117..759350 (-) 234 WP_006531113.1 hypothetical protein -
  I6H76_RS03805 (I6H76_03805) - 759350..759709 (-) 360 WP_043878259.1 hypothetical protein -
  I6H76_RS03810 (I6H76_03810) - 759793..760449 (-) 657 WP_006531111.1 PilZ domain-containing protein -
  I6H76_RS10050 - 760551..760712 (-) 162 WP_006531110.1 hypothetical protein -
  I6H76_RS03815 (I6H76_03815) - 760718..761677 (-) 960 WP_231158954.1 sensor domain-containing diguanylate cyclase -
  I6H76_RS03825 (I6H76_03825) trmB 762081..762719 (-) 639 WP_006531108.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  I6H76_RS03830 (I6H76_03830) ccrZ 762719..763516 (-) 798 WP_014334332.1 cell cycle regulator CcrZ -
  I6H76_RS03835 (I6H76_03835) pptB 763586..764620 (-) 1035 WP_014334331.1 ABC transporter permease Regulator
  I6H76_RS03840 (I6H76_03840) pptA 764623..765348 (-) 726 WP_006531105.1 ABC transporter ATP-binding protein Regulator
  I6H76_RS03845 (I6H76_03845) - 765412..765831 (+) 420 WP_006531104.1 HIT family protein -
  I6H76_RS03850 (I6H76_03850) - 765828..766133 (+) 306 WP_006531103.1 hypothetical protein -
  I6H76_RS03855 (I6H76_03855) brpA 766219..767391 (-) 1173 WP_006531102.1 biofilm formation/cell division transcriptional regulator BrpA -
  I6H76_RS03860 (I6H76_03860) - 767402..767914 (-) 513 WP_006531101.1 GNAT family N-acetyltransferase -
  I6H76_RS03865 (I6H76_03865) tsaE 767907..768350 (-) 444 WP_006531100.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -

Sequence

Protein


Download         Length: 344 a.a.        Molecular weight: 40012.41 Da        Isoelectric Point: 10.3705

>NTDB_id=452795 I6H76_RS03835 WP_014334331.1 763586..764620(-) (pptB) [Streptococcus infantarius strain FDAARGOS_1019]
MKEVFRKRRSLFLGQCLKYLRYVLNDHFVLVLLFLSGFLMVQYGELLKHFPKQHWWIDVILVIVTLALLSLGKIATYIEA
PDKLFYLPKEEEVVAWIHQARVRSFGVWAVLQTAVFLLLAPIFFKLGFSVPVFVVCLLALLAIKWVIMARKEQVFFRAGH
FSWEAAITYETKRRQSILKFFALFTTVKGISASVKRRVYLDKILGLVKKRHDKTWSNLYLRAFLRSSDYLALTLRLVLLG
VLVLLFIPNHLVAAGLALTFNYLLLFQLLGLAQHFEYQYLTRLYPISETQKMANLKVFLRTLSYMICLLDVLLCFSLKAA
GLLILITVIVTEWYLPYKIAKMID

Nucleotide


Download         Length: 1035 bp        

>NTDB_id=452795 I6H76_RS03835 WP_014334331.1 763586..764620(-) (pptB) [Streptococcus infantarius strain FDAARGOS_1019]
ATGAAAGAAGTTTTTCGAAAACGACGCAGCCTCTTTTTAGGGCAATGTCTGAAATACTTGCGTTATGTCTTAAATGATCA
TTTTGTCTTGGTCTTGCTTTTCTTATCAGGTTTTTTGATGGTCCAATACGGTGAGTTATTAAAGCATTTTCCAAAGCAAC
ATTGGTGGATTGATGTCATTTTGGTCATTGTGACGCTTGCTCTTCTTAGTCTTGGTAAAATTGCAACTTATATTGAGGCA
CCAGATAAGCTATTTTATTTGCCAAAGGAAGAAGAAGTGGTGGCTTGGATTCACCAAGCAAGAGTCCGTTCTTTTGGTGT
TTGGGCAGTGCTACAAACAGCTGTTTTCTTGTTGCTAGCACCTATTTTCTTTAAATTAGGTTTCTCAGTTCCTGTTTTTG
TGGTCTGTTTACTTGCTTTACTTGCTATTAAGTGGGTGATTATGGCGAGAAAGGAACAAGTCTTTTTTAGAGCTGGGCAT
TTTTCTTGGGAAGCTGCCATTACTTATGAAACCAAGCGCCGTCAATCTATTTTGAAATTCTTTGCCCTCTTTACAACGGT
TAAAGGAATTTCGGCAAGTGTCAAACGTCGTGTTTACTTAGATAAGATACTCGGTTTGGTTAAGAAACGTCACGATAAAA
CGTGGTCGAACCTTTATCTCAGGGCCTTTCTTCGTAGTTCTGATTATCTGGCTTTGACTTTGCGTCTGGTTTTGTTAGGT
GTTCTTGTTTTATTATTTATTCCAAATCATCTGGTAGCAGCTGGCCTTGCTTTGACTTTTAATTATCTTTTACTGTTTCA
GTTGTTAGGACTTGCTCAACATTTTGAGTATCAATATTTAACACGCTTATACCCCATTTCAGAAACGCAGAAAATGGCGA
ATTTAAAGGTTTTTCTACGAACTTTGTCCTATATGATTTGCTTGCTTGATGTGTTATTATGCTTTTCTTTGAAGGCTGCA
GGGCTTCTGATTTTAATTACTGTAATTGTTACAGAATGGTATCTTCCTTACAAAATTGCGAAGATGATTGACTAG

Domains

Predicted by InterProScan.

Bacterial ABC transporter protein EcsB (EcsB)

(2-153)

Bacterial ABC transporter protein EcsB (EcsB)

(160-328)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptB Streptococcus thermophilus LMD-9

47.384

100

0.474
  pptB Streptococcus salivarius strain HSISS4

46.221

100

0.462