Detailed information NTG0452663

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: I6I21_RS07955
• Genome accession: NZ_CP065984
• Coordinates: 1569543..1570619 (-)
• Length: 358 a.a.
• NCBI ID: WP_004254743.1
• Uniprot ID: -
• Organism: Lactococcus lactis strain FDAARGOS_1064
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1564543..1575619

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I6I21_RS07935 (I6I21_07935)	galE	1566573..1567553 (+)	981	WP_010906245.1	UDP-glucose 4-epimerase GalE	-
I6I21_RS07940 (I6I21_07940)	-	1567676..1568620 (+)	945	WP_010906244.1	alpha/beta hydrolase	-
I6I21_RS07945 (I6I21_07945)	-	1568633..1569010 (-)	378	WP_010906243.1	MerR family transcriptional regulator	-
I6I21_RS07950 (I6I21_07950)	-	1569088..1569456 (+)	369	WP_004254740.1	carboxymuconolactone decarboxylase family protein	-
I6I21_RS07955 (I6I21_07955)	recF	1569543..1570619 (-)	1077	WP_004254743.1	DNA replication/repair protein RecF	Machinery gene
I6I21_RS07960 (I6I21_07960)	yaaA	1570619..1570981 (-)	363	WP_004254746.1	S4 domain-containing protein YaaA	-
I6I21_RS07965 (I6I21_07965)	yfmF	1571179..1572465 (+)	1287	WP_021214872.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
I6I21_RS07970 (I6I21_07970)	yfmH	1572455..1573738 (+)	1284	WP_004254752.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
I6I21_RS07975 (I6I21_07975)	-	1573950..1574846 (+)	897	WP_004254758.1	helix-turn-helix domain-containing protein	-
I6I21_RS07980 (I6I21_07980)	pgsA	1574887..1575459 (+)	573	WP_004254763.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-

Sequence

Protein

• Length: 358 a.a.
• Molecular weight: 41382.31 Da
• Isoelectric Point: 6.8652

>NTDB_id=452663 I6I21_RS07955 WP_004254743.1 1569543..1570619(-) (recF) [Lactococcus lactis strain FDAARGOS_1064]
MKLKAIELKNFRNYEELKLDFHPNLNIFLGQNAQGKTNILEAIHFLALTRSHRTSHDKELISWSQQEMKVSGVVEKAHAT
VPLEVQLSPKGRIAKANHLKENRLADYIGQLKILMFAPENLELVKGSPATRRKFMDIELGQIHAVYLYDSMRYNRALKER
NAYLKFDKDKIDKNFLSVLDGQLAEHGNKIMLERQNFIDKLEVHAKKIHEQLTHGKENLKIIYNQNVKTDFSKELLIRQD
HDIFRHQTSVGPHRDDLQFFINEINVADFGSQGQQRTVALSIKLAEIDLIFEETGEYPILLLDDVMSELDNHRQLDLIET
SLGKTQTFITTTTLDHLKNLPENLSIFHVNAGTIEQEQ

Nucleotide

• Length: 1077 bp

>NTDB_id=452663 I6I21_RS07955 WP_004254743.1 1569543..1570619(-) (recF) [Lactococcus lactis strain FDAARGOS_1064]
ATGAAACTCAAAGCAATTGAACTCAAAAATTTTCGTAATTATGAGGAATTAAAACTTGATTTTCACCCTAATCTCAATAT
TTTTTTAGGACAAAATGCTCAAGGGAAAACAAATATTCTTGAGGCGATTCATTTTTTAGCACTCACTCGTAGTCACAGAA
CAAGTCACGACAAAGAGCTCATTTCTTGGTCACAACAAGAAATGAAGGTCTCAGGAGTCGTTGAAAAAGCTCATGCAACT
GTTCCACTTGAAGTTCAATTAAGTCCCAAAGGGAGAATTGCTAAAGCCAATCATCTCAAAGAAAATCGCTTAGCCGACTA
CATTGGTCAACTAAAAATCTTGATGTTTGCACCTGAAAATTTGGAATTAGTCAAAGGTTCTCCAGCTACCCGCAGAAAAT
TTATGGATATTGAACTGGGACAAATCCATGCGGTTTACCTTTATGATTCCATGCGATATAATCGTGCGTTAAAAGAACGG
AATGCTTACTTAAAATTTGATAAAGACAAAATTGATAAAAATTTTTTAAGTGTTCTTGACGGACAATTAGCTGAACATGG
TAATAAAATCATGCTTGAGCGGCAAAATTTTATTGATAAACTTGAAGTTCATGCAAAAAAAATCCATGAGCAACTTACTC
ATGGTAAAGAAAATTTAAAAATCATTTATAATCAAAATGTGAAAACTGACTTTTCAAAAGAATTATTGATCAGACAAGAC
CATGATATTTTTAGGCATCAAACATCGGTTGGCCCTCATCGTGACGATTTACAATTTTTTATCAATGAGATTAATGTTGC
TGATTTTGGTAGTCAAGGACAACAACGAACCGTTGCTCTCTCAATTAAATTAGCAGAAATTGATTTAATTTTTGAAGAGA
CTGGTGAGTATCCGATTTTACTTTTAGATGATGTCATGAGTGAATTAGACAATCATCGTCAACTTGATTTGATTGAAACA
AGTTTGGGTAAAACACAAACTTTTATAACTACAACTACTCTTGATCATCTTAAAAATTTACCTGAAAATCTGAGTATTTT
CCATGTTAATGCTGGAACCATTGAACAAGAGCAATAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-353)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	55	100	0.553
recF	Bacillus subtilis subsp. subtilis str. 168	45.69	97.207	0.444