Detailed information    

insolico Bioinformatically predicted

Overview

Name   degQ   Type   Regulator
Locus tag   HSX12_RS15045 Genome accession   NZ_CP054467
Coordinates   3049178..3049318 (-) Length   46 a.a.
NCBI ID   WP_003152043.1    Uniprot ID   A3KLB4
Organism   Bacillus velezensis strain CF57     
Function   modification of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 3044178..3054318
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HSX12_RS15020 (HSX12_14915) - 3044474..3044857 (-) 384 WP_007408674.1 hotdog fold thioesterase -
  HSX12_RS15025 (HSX12_14920) comA 3044879..3045523 (-) 645 WP_003152052.1 response regulator transcription factor Regulator
  HSX12_RS15030 (HSX12_14925) comP 3045604..3047913 (-) 2310 WP_033574914.1 histidine kinase Regulator
  HSX12_RS15035 (HSX12_14930) - 3047933..3048109 (-) 177 WP_007408675.1 competence pheromone ComX -
  HSX12_RS15040 (HSX12_14935) comQ 3048109..3049047 (-) 939 WP_020954300.1 polyprenyl synthetase family protein Regulator
  HSX12_RS15045 (HSX12_14940) degQ 3049178..3049318 (-) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  HSX12_RS15050 (HSX12_14945) - 3049784..3050125 (+) 342 WP_015418107.1 hypothetical protein -
  HSX12_RS15055 (HSX12_14950) - 3050132..3051355 (-) 1224 WP_007408678.1 EAL and HDOD domain-containing protein -
  HSX12_RS15060 (HSX12_14955) - 3051485..3052951 (-) 1467 WP_020954301.1 nicotinate phosphoribosyltransferase -
  HSX12_RS15065 (HSX12_14960) - 3052969..3053520 (-) 552 WP_003152033.1 cysteine hydrolase family protein -
  HSX12_RS15070 (HSX12_14965) - 3053617..3054015 (-) 399 WP_003152031.1 YueI family protein -

Sequence

Protein


Download         Length: 46 a.a.        Molecular weight: 5518.30 Da        Isoelectric Point: 4.9432

>NTDB_id=452644 HSX12_RS15045 WP_003152043.1 3049178..3049318(-) (degQ) [Bacillus velezensis strain CF57]
MENKLEEVKQLLFRLENDIRETTDSLRNINKSIDQLDKFSYAMKIS

Nucleotide


Download         Length: 141 bp        

>NTDB_id=452644 HSX12_RS15045 WP_003152043.1 3049178..3049318(-) (degQ) [Bacillus velezensis strain CF57]
GTGGAAAACAAATTAGAAGAAGTAAAGCAATTATTATTCCGACTTGAAAATGATATCAGAGAAACAACCGACTCATTACG
AAACATTAACAAAAGCATTGATCAGCTCGATAAATTCTCATATGCAATGAAAATTTCTTAA

Domains

Predicted by InterproScan.

DegQ (SacQ) family (DegQ)

(1-46)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A3KLB4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  degQ Bacillus subtilis subsp. subtilis str. 168

89.13

100

0.891