Detailed information NTG0045260

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: SDSE_RS21205
• Genome accession: NC_019042
• Coordinates: 2164171..2165277 (+)
• Length: 368 a.a.
• NCBI ID: WP_015058179.1
• Uniprot ID: -
• Organism: Streptococcus dysgalactiae subsp. equisimilis AC-2713
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2159171..2170277

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SDSE_RS21180 (S_dysgal_equisimilis_AC2713_2227)	pgsA	2159281..2159823 (-)	543	WP_015058176.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
SDSE_RS21185 (S_dysgal_equisimilis_AC2713_2228)	-	2159837..2160868 (-)	1032	WP_015058177.1	helix-turn-helix domain-containing protein	-
SDSE_RS21190 (S_dysgal_equisimilis_AC2713_2229)	-	2160918..2162201 (-)	1284	WP_015058178.1	pitrilysin family protein	-
SDSE_RS21195 (S_dysgal_equisimilis_AC2713_2230)	-	2162203..2163447 (-)	1245	WP_012767685.1	pitrilysin family protein	-
SDSE_RS21200 (S_dysgal_equisimilis_AC2713_2231)	yaaA	2163756..2164169 (+)	414	WP_003055132.1	S4 domain-containing protein YaaA	-
SDSE_RS21205 (S_dysgal_equisimilis_AC2713_2232)	recF	2164171..2165277 (+)	1107	WP_015058179.1	DNA replication/repair protein RecF	Machinery gene
SDSE_RS21210 (S_dysgal_equisimilis_AC2713_2233)	-	2165335..2166198 (-)	864	WP_003055126.1	GRP family sugar transporter	-
SDSE_RS21215 (S_dysgal_equisimilis_AC2713_2234)	guaB	2166410..2167891 (-)	1482	WP_012767688.1	IMP dehydrogenase	-
SDSE_RS21220 (S_dysgal_equisimilis_AC2713_2235)	trpS	2168108..2169130 (-)	1023	WP_003055141.1	tryptophan--tRNA ligase	-

Sequence

Protein

• Length: 368 a.a.
• Molecular weight: 41924.83 Da
• Isoelectric Point: 7.8299

>NTDB_id=45260 SDSE_RS21205 WP_015058179.1 2164171..2165277(+) (recF) [Streptococcus dysgalactiae subsp. equisimilis AC-2713]
MWIKELELKHYRNYDHLLASFSSGLNVFIGNNAQGKTNFLEAIYFLSLTRSHRTRADKELIHFDHSTVSLTGKIQRVSGT
VDLEINLSEKGRVTKINALKQAKLSDYIGTMMVVLFAPEDLQLVKGAPSLRRKFIDIDLGQIKPVYLSELSHYNHVLKQR
NSYLKSAQQIDAAFLAVLDEQLASYGTRVMEHRIDFINALEKEANTHHQAISNGLENLSLSYQSSVVFDKRTNIYQQFLH
QLEKNHQKDFFRKNTSVGPHRDDLAFYINGMNANFASQGQHRSLILSLKMAEVSLMKALTGDNPILLLDDVMSELDNTRQ
TKLLETVIKENVQTFITTTSLDHLSQLPEGIRIFHVTKGTIQVDSEIH

Nucleotide

• Length: 1107 bp

>NTDB_id=45260 SDSE_RS21205 WP_015058179.1 2164171..2165277(+) (recF) [Streptococcus dysgalactiae subsp. equisimilis AC-2713]
ATGTGGATTAAAGAGTTAGAGTTAAAACATTATCGCAATTATGACCACCTGCTTGCCTCATTTTCATCGGGTTTAAATGT
CTTTATCGGTAATAATGCTCAAGGAAAAACCAATTTTCTCGAGGCAATCTATTTTCTATCACTTACTAGAAGTCATCGCA
CGAGGGCTGATAAAGAATTGATTCATTTTGATCACTCAACTGTTTCTCTTACTGGTAAGATTCAGCGTGTTAGTGGTACT
GTTGATTTAGAAATCAATCTATCAGAGAAAGGACGCGTGACAAAGATTAATGCGCTAAAACAAGCAAAATTATCTGATTA
TATTGGAACGATGATGGTTGTGCTTTTTGCACCAGAAGATTTGCAACTAGTTAAGGGGGCACCTAGCCTTCGTCGCAAAT
TTATCGACATTGACCTTGGTCAAATTAAACCTGTTTACTTATCTGAGTTATCCCATTATAACCACGTGCTTAAACAGCGT
AATAGCTATTTAAAAAGTGCCCAGCAAATTGATGCGGCTTTTCTAGCTGTTCTAGATGAGCAATTAGCTAGCTATGGAAC
CCGTGTCATGGAACATCGTATTGATTTTATCAATGCATTAGAGAAAGAAGCAAATACTCATCACCAAGCCATCTCAAATG
GTTTAGAAAATCTCTCTCTCTCCTATCAGTCGTCAGTTGTCTTTGACAAAAGAACTAATATTTACCAACAATTTTTACAC
CAACTTGAAAAAAATCATCAGAAAGATTTCTTCCGTAAAAACACTAGTGTGGGCCCACATCGCGATGACTTAGCCTTTTA
CATTAACGGAATGAATGCTAACTTTGCTAGTCAAGGTCAGCACCGCAGCCTTATTCTTTCCTTAAAAATGGCTGAAGTTA
GTTTAATGAAGGCCTTGACTGGAGATAATCCTATTCTTTTACTAGACGATGTCATGAGCGAGCTAGACAATACACGACAA
ACAAAGTTACTTGAAACAGTAATTAAAGAAAATGTCCAAACCTTTATCACAACAACAAGTTTGGATCACCTGTCACAGTT
GCCAGAAGGTATCCGTATTTTTCACGTGACAAAAGGAACCATTCAAGTTGATTCTGAAATTCACTAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-361)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	63.187	98.913	0.625
recF	Bacillus subtilis subsp. subtilis str. 168	45.283	100	0.457