Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   SDSE_RS15325 Genome accession   NC_019042
Coordinates   950948..951613 (-) Length   221 a.a.
NCBI ID   WP_015057561.1    Uniprot ID   -
Organism   Streptococcus dysgalactiae subsp. equisimilis AC-2713     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 945948..956613
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SDSE_RS15295 (S_dysgal_equisimilis_AC2713_999) xerS 946538..947608 (+) 1071 WP_012766932.1 tyrosine recombinase XerS Machinery gene
  SDSE_RS15300 (S_dysgal_equisimilis_AC2713_1000) - 947685..948125 (+) 441 WP_015057559.1 NusG domain II-containing protein -
  SDSE_RS15305 (S_dysgal_equisimilis_AC2713_1001) - 948196..949146 (-) 951 WP_003057530.1 1,4-dihydroxy-2-naphthoate polyprenyltransferase -
  SDSE_RS15310 (S_dysgal_equisimilis_AC2713_1002) - 949136..949452 (-) 317 Protein_892 FAD:protein FMN transferase -
  SDSE_RS15315 (S_dysgal_equisimilis_AC2713_1003) - 949457..949945 (+) 489 WP_012766936.1 Gx transporter family protein -
  SDSE_RS15320 (S_dysgal_equisimilis_AC2713_1004) - 950004..950951 (-) 948 WP_012766937.1 ATP-binding protein -
  SDSE_RS15325 (S_dysgal_equisimilis_AC2713_1005) braR 950948..951613 (-) 666 WP_015057561.1 response regulator transcription factor Regulator
  SDSE_RS15330 (S_dysgal_equisimilis_AC2713_1006) - 951657..953612 (-) 1956 WP_015057562.1 ABC transporter permease -
  SDSE_RS15335 (S_dysgal_equisimilis_AC2713_1007) - 953614..954366 (-) 753 WP_015057563.1 ABC transporter ATP-binding protein -
  SDSE_RS15340 (S_dysgal_equisimilis_AC2713_1008) - 954403..955368 (-) 966 WP_015057564.1 S41 family peptidase -
  SDSE_RS15345 (S_dysgal_equisimilis_AC2713_1009) - 955534..956016 (+) 483 WP_003057532.1 PASTA domain-containing protein -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 25682.38 Da        Isoelectric Point: 5.5346

>NTDB_id=45214 SDSE_RS15325 WP_015057561.1 950948..951613(-) (braR) [Streptococcus dysgalactiae subsp. equisimilis AC-2713]
MTKHDKIYIIEDDETILTLLHNHLSQSYDVKTVTNFRDIKQEVLDYQPDLILMDITLPFFNGFYWTTEIRKHLTIPIIFI
SSSNDEMDTVMALNMGGDDFVSKPFSLTILDAKIAAFLRRAQQFTSDDISLDQFKLHFDGTFSNGNEAVTLSPTEHKILT
ILMTRHQEIVSKEEILERLWENDNFIDHNTLNVNMTRLRKKIATIGFDRIHTIRGVGYLVK

Nucleotide


Download         Length: 666 bp        

>NTDB_id=45214 SDSE_RS15325 WP_015057561.1 950948..951613(-) (braR) [Streptococcus dysgalactiae subsp. equisimilis AC-2713]
ATGACAAAACATGATAAAATCTATATTATTGAAGATGATGAGACCATTTTAACCCTTCTTCACAATCACCTTAGCCAATC
TTATGATGTTAAGACGGTCACTAACTTTAGGGATATTAAACAGGAGGTACTTGACTACCAGCCAGACCTTATCTTAATGG
ATATTACCCTACCTTTTTTCAATGGTTTTTACTGGACCACTGAAATCCGAAAACACTTAACGATTCCTATCATTTTTATT
TCCAGTAGTAATGATGAGATGGATACCGTTATGGCTCTTAATATGGGGGGAGATGACTTTGTCTCGAAACCTTTTTCGCT
AACCATTTTAGATGCTAAAATAGCAGCCTTTTTACGGCGTGCACAACAATTTACTAGTGACGACATTAGTCTCGATCAGT
TTAAACTCCATTTTGACGGTACCTTTTCAAATGGGAACGAAGCCGTTACCTTATCACCAACCGAACATAAAATCCTAACC
ATTTTAATGACTAGACATCAAGAAATTGTTTCTAAGGAAGAAATCTTGGAAAGACTTTGGGAAAATGATAATTTTATTGA
TCACAATACCCTGAATGTCAATATGACACGTCTACGCAAAAAAATTGCAACTATTGGTTTTGACCGTATTCATACTATAA
GAGGAGTGGGGTATCTCGTTAAATGA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(7-114)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-219)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

45.909

99.548

0.457

Multiple sequence alignment