Detailed information    

insolico Bioinformatically predicted

Overview


Name   xerS   Type   Machinery gene
Locus tag   SDSE_RS15295 Genome accession   NC_019042
Coordinates   946538..947608 (+) Length   356 a.a.
NCBI ID   WP_012766932.1    Uniprot ID   A0A9X9GBX6
Organism   Streptococcus dysgalactiae subsp. equisimilis AC-2713     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 941538..952608
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SDSE_RS15275 (S_dysgal_equisimilis_AC2713_995) - 941550..942574 (+) 1025 Protein_885 Gfo/Idh/MocA family oxidoreductase -
  SDSE_RS15280 (S_dysgal_equisimilis_AC2713_996) - 942615..944072 (+) 1458 WP_080600809.1 response regulator -
  SDSE_RS15285 (S_dysgal_equisimilis_AC2713_997) - 944197..944619 (+) 423 WP_003058336.1 cupin domain-containing protein -
  SDSE_RS15290 (S_dysgal_equisimilis_AC2713_998) - 944650..945894 (-) 1245 WP_015057558.1 peptidoglycan bridge formation glycyltransferase FemA/FemB family protein -
  SDSE_RS15295 (S_dysgal_equisimilis_AC2713_999) xerS 946538..947608 (+) 1071 WP_012766932.1 tyrosine recombinase XerS Machinery gene
  SDSE_RS15300 (S_dysgal_equisimilis_AC2713_1000) - 947685..948125 (+) 441 WP_015057559.1 NusG domain II-containing protein -
  SDSE_RS15305 (S_dysgal_equisimilis_AC2713_1001) - 948196..949146 (-) 951 WP_003057530.1 1,4-dihydroxy-2-naphthoate polyprenyltransferase -
  SDSE_RS15310 (S_dysgal_equisimilis_AC2713_1002) - 949136..949452 (-) 317 Protein_892 FAD:protein FMN transferase -
  SDSE_RS15315 (S_dysgal_equisimilis_AC2713_1003) - 949457..949945 (+) 489 WP_012766936.1 Gx transporter family protein -
  SDSE_RS15320 (S_dysgal_equisimilis_AC2713_1004) - 950004..950951 (-) 948 WP_012766937.1 ATP-binding protein -
  SDSE_RS15325 (S_dysgal_equisimilis_AC2713_1005) braR 950948..951613 (-) 666 WP_015057561.1 response regulator transcription factor Regulator

Sequence


Protein


Download         Length: 356 a.a.        Molecular weight: 41385.62 Da        Isoelectric Point: 9.5512

>NTDB_id=45213 SDSE_RS15295 WP_012766932.1 946538..947608(+) (xerS) [Streptococcus dysgalactiae subsp. equisimilis AC-2713]
MRRDLLLEKIETYKAIMPWYVLEYYQSKLAVPYSFTTLYEYLKEYKRFFDWLMDADLTDATVIADIDLATLEHLTKKDLE
AFVLYLRERPSLNTYSTKEGLSQTTINRTLSALSSLYKYLTEEVENDQGEPYFYRNVMKKVSTKKKKETLASRAENIKQK
LFLGDETMGFLEYVDKDYELKLSNRAKSSFRKNKERDLAIIALLLASGVRLSEAVNLDLKDVNLNMMVIEVIRKGGKRDS
VNVAGFAKPYLEAYLAIRKNRYKAEKQDLAFFLTEYRGVPNRMDASSIEKMVGKYSQDFKIRVTPHKLRHTLATRLYDAT
KSQVLVSHQLGHASTQVTDLYTHIVNDEQKNALDKL

Nucleotide


Download         Length: 1071 bp        

>NTDB_id=45213 SDSE_RS15295 WP_012766932.1 946538..947608(+) (xerS) [Streptococcus dysgalactiae subsp. equisimilis AC-2713]
ATGAGACGTGATTTATTACTCGAAAAAATAGAAACTTATAAAGCTATCATGCCTTGGTATGTGTTAGAATACTATCAGTC
AAAATTGGCTGTCCCATACAGTTTTACAACGCTATATGAGTATTTAAAAGAATACAAACGTTTTTTTGACTGGTTAATGG
ATGCTGACTTAACGGATGCGACTGTCATTGCTGATATCGATTTAGCGACTCTTGAACACTTGACTAAGAAAGATTTAGAG
GCCTTTGTTCTGTACCTAAGAGAACGCCCTTCTCTTAATACTTATTCCACCAAAGAGGGTCTTTCTCAAACAACGATTAA
TCGCACTTTGTCTGCTTTATCAAGCCTTTATAAATATTTGACTGAAGAGGTTGAAAATGATCAGGGAGAGCCTTATTTCT
ATCGGAATGTCATGAAGAAGGTGTCCACGAAGAAGAAAAAAGAAACCCTAGCTTCTAGAGCTGAAAACATTAAACAAAAG
CTTTTTCTAGGGGATGAAACCATGGGTTTTCTAGAGTATGTAGATAAGGACTATGAACTCAAATTATCCAATCGTGCCAA
ATCTTCTTTCCGTAAAAATAAAGAGAGAGATCTAGCTATTATTGCCCTACTACTGGCCTCAGGCGTTCGTCTATCAGAAG
CCGTTAATCTTGATTTAAAAGATGTTAACCTTAATATGATGGTTATTGAGGTTATCCGCAAAGGGGGAAAACGAGATTCA
GTGAATGTTGCAGGTTTTGCTAAACCTTATTTAGAAGCTTATCTGGCTATTCGCAAGAATCGTTATAAGGCTGAAAAACA
AGACCTTGCCTTCTTTTTAACGGAATATCGAGGAGTCCCTAATCGCATGGATGCCTCCAGTATTGAAAAAATGGTTGGTA
AATACTCTCAAGATTTTAAAATTCGTGTGACTCCCCATAAGTTACGACACACATTAGCCACACGTCTTTATGATGCGACC
AAGTCCCAGGTTTTGGTCAGTCATCAATTGGGGCATGCATCGACTCAAGTTACCGATTTGTATACCCATATTGTTAACGA
TGAACAAAAAAACGCCTTAGACAAATTATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A9X9GBX6

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  xerS Streptococcus pneumoniae R6

80.618

100

0.806


Multiple sequence alignment