Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptB   Type   Regulator
Locus tag   JAN99_RS02265 Genome accession   NZ_CP065927
Coordinates   440035..441069 (+) Length   344 a.a.
NCBI ID   WP_010922583.1    Uniprot ID   A0A0H2UWB0
Organism   Streptococcus pyogenes strain emm9ST603     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 435035..446069
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JAN99_RS02235 (JAN99_02230) tsaE 436100..436561 (+) 462 WP_002988647.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  JAN99_RS02240 (JAN99_02235) - 436536..437060 (+) 525 WP_063811834.1 N-acetyltransferase -
  JAN99_RS02245 (JAN99_02240) - 437069..438352 (+) 1284 WP_111693352.1 LCP family protein -
  JAN99_RS02250 (JAN99_02245) - 438463..438819 (-) 357 WP_030126323.1 hypothetical protein -
  JAN99_RS02255 (JAN99_02250) - 438816..439235 (-) 420 WP_002983376.1 HIT family protein -
  JAN99_RS02260 (JAN99_02255) pptA 439307..440032 (+) 726 WP_198463004.1 ABC transporter ATP-binding protein Regulator
  JAN99_RS02265 (JAN99_02260) pptB 440035..441069 (+) 1035 WP_010922583.1 ABC transporter permease Regulator
  JAN99_RS02270 (JAN99_02265) - 441133..441924 (+) 792 WP_002983385.1 phosphotransferase family protein -
  JAN99_RS02275 (JAN99_02270) trmB 441924..442559 (+) 636 WP_002983387.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  JAN99_RS02285 (JAN99_02280) rimP 442818..443354 (+) 537 WP_002988815.1 ribosome maturation factor RimP -
  JAN99_RS02290 (JAN99_02285) nusA 443529..444686 (+) 1158 WP_002988817.1 transcription termination factor NusA -
  JAN99_RS02295 (JAN99_02290) - 444702..444998 (+) 297 WP_002983486.1 YlxR family protein -
  JAN99_RS02300 (JAN99_02295) - 444991..445293 (+) 303 WP_111693350.1 YlxQ-related RNA-binding protein -

Sequence

Protein


Download         Length: 344 a.a.        Molecular weight: 40274.52 Da        Isoelectric Point: 10.3713

>NTDB_id=452013 JAN99_RS02265 WP_010922583.1 440035..441069(+) (pptB) [Streptococcus pyogenes strain emm9ST603]
MKALFLKRRQDFQKQQNKYLRYVLNDHFVLVLMFLLGFAMVQYGQLLNHFPTNHLPIQVCLGILIPLLLSMGSIATYLEE
ADQHFLLPKEEEVISYIKQAERLSFLLWGTLQTAVLLFLYPIFRRLGLSLFIFIILVLILLALKRVVLSRKTRYFLRGNR
LDWAKAVAFESNRKQSILKFYSLFTTVKGISTKVKERTYLNPLLKLVKQTPSNLWLSLYARAFLRSSDYLGLFLRLMLLS
SLSVFFIHNLYLSVSLALIFNYLVVFQLLSLYYHYDYHYMTSLYPENSRSKKKNMLSFLRGLSFLMLIVNMLCCSSAPKA
LILIVGMVFIACIYLPYKLKKIID

Nucleotide


Download         Length: 1035 bp        

>NTDB_id=452013 JAN99_RS02265 WP_010922583.1 440035..441069(+) (pptB) [Streptococcus pyogenes strain emm9ST603]
ATGAAAGCATTATTTCTGAAACGCCGTCAAGACTTTCAAAAACAACAAAACAAATACCTTCGTTACGTCTTAAATGATCA
CTTTGTTTTGGTGTTGATGTTTTTATTAGGCTTTGCTATGGTGCAGTATGGTCAGCTACTAAACCATTTTCCAACGAATC
ATCTACCTATTCAGGTTTGTCTTGGGATATTGATCCCATTATTGCTCAGTATGGGATCTATAGCAACGTATCTAGAAGAG
GCAGATCAGCATTTCTTACTTCCAAAAGAAGAAGAAGTGATTTCTTATATCAAACAAGCTGAGCGACTCTCTTTTTTGCT
TTGGGGAACTTTGCAGACTGCTGTATTGCTCTTTTTATATCCTATTTTTAGACGTCTAGGTCTGTCTTTATTTATTTTTA
TTATCTTAGTTTTGATATTATTGGCACTAAAAAGAGTAGTGCTTAGTCGAAAGACAAGATATTTTTTGAGAGGAAATCGT
TTAGATTGGGCAAAAGCTGTCGCATTTGAAAGCAATCGCAAGCAAAGTATTTTAAAGTTTTATTCTCTTTTTACAACAGT
CAAAGGAATTTCTACAAAAGTGAAAGAAAGAACTTATCTAAATCCTCTTTTAAAATTAGTTAAGCAAACTCCTTCAAACC
TTTGGCTGTCCCTTTATGCTAGAGCCTTTTTACGTAGTTCAGATTATTTGGGCTTATTTTTACGACTAATGCTATTAAGC
TCATTATCTGTATTTTTTATCCATAATCTTTATTTGTCAGTAAGTTTAGCACTCATTTTTAACTATTTAGTTGTATTCCA
ATTACTTTCACTTTATTATCACTACGATTACCATTATATGACTAGTCTTTATCCTGAAAATAGTCGGAGCAAGAAGAAAA
ATATGTTAAGTTTTTTACGAGGTTTAAGCTTTTTAATGTTAATCGTCAATATGCTGTGTTGCTCATCAGCGCCAAAAGCA
CTCATTTTGATTGTAGGTATGGTTTTCATAGCTTGTATATATCTACCTTATAAGTTAAAGAAGATCATTGACTAA

Domains

Predicted by InterProScan.

Bacterial ABC transporter protein EcsB (EcsB)

(158-330)

Bacterial ABC transporter protein EcsB (EcsB)

(2-151)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2UWB0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptB Streptococcus thermophilus LMD-9

43.023

100

0.43
  pptB Streptococcus salivarius strain HSISS4

42.733

100

0.427