Detailed information NTG0045177

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: BAMTA208_RS11520
• Genome accession: NC_017188
• Coordinates: 2302826..2303779 (-)
• Length: 317 a.a.
• NCBI ID: WP_013351813.1
• Uniprot ID: A0AAP7TCS7
• Organism: Bacillus amyloliquefaciens TA208
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 2297826..2308779

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BAMTA208_RS11490 (BAMTA208_11925)	-	2297979..2298965 (-)	987	WP_014470616.1	ABC transporter ATP-binding protein	-
BAMTA208_RS11495 (BAMTA208_11930)	-	2299139..2299924 (-)	786	WP_014470617.1	DUF2268 domain-containing protein	-
BAMTA208_RS11500 (BAMTA208_11935)	fabF	2300008..2301246 (-)	1239	WP_013351817.1	beta-ketoacyl-ACP synthase II	-
BAMTA208_RS11505 (BAMTA208_11940)	-	2301270..2302208 (-)	939	WP_013351816.1	beta-ketoacyl-ACP synthase III	-
BAMTA208_RS11510 (BAMTA208_11945)	-	2302374..2302592 (+)	219	WP_013351815.1	hypothetical protein	-
BAMTA208_RS11515 (BAMTA208_11950)	comZ	2302622..2302813 (-)	192	WP_013351814.1	ComZ family protein	Regulator
BAMTA208_RS11520 (BAMTA208_11955)	med	2302826..2303779 (-)	954	WP_013351813.1	BMP family ABC transporter substrate-binding protein	Regulator
BAMTA208_RS11525 (BAMTA208_11960)	-	2303873..2304439 (-)	567	WP_013351812.1	hypothetical protein	-
BAMTA208_RS11530 (BAMTA208_11965)	-	2304520..2305254 (-)	735	WP_013351811.1	hypothetical protein	-
BAMTA208_RS11535 (BAMTA208_11970)	-	2305515..2305703 (+)	189	WP_013351810.1	YjzD family protein	-
BAMTA208_RS11540 (BAMTA208_11975)	-	2305744..2305923 (-)	180	WP_013351809.1	YjzC family protein	-
BAMTA208_RS11545 (BAMTA208_11980)	argF	2306015..2306971 (-)	957	WP_013351808.1	ornithine carbamoyltransferase	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 35342.94 Da
• Isoelectric Point: 4.5494

>NTDB_id=45177 BAMTA208_RS11520 WP_013351813.1 2302826..2303779(-) (med) [Bacillus amyloliquefaciens TA208]
MITRLVMIFSVLLLLSGCAQTPFKGKIEKVGMLFPDTISDLVWGTKGYKGLLAIQSEFNVDVYYKENIRSDEDILKAIDD
LHKKGVNLLYGHGNEYEEIFNMISKDYPDMEFVVANGTAKNDNVTSVHLMGEAMGFFGGMTAAHMSKTNEVGVIASFLWQ
PEVDGFIKGAKYENPDITVNTEFTDHWDNGNEALHLYEKLKAEGTDVVYPAGDGYNVPVIQQIKKDGLYAIGYVAEQSYL
GKNTVLTSTVQNVDKAYTLIAEQYNKGTLKSGDHNFDFREGVVEMGTFSPLVDKAFQDKISDLVKTYNQTNELPSNE

Nucleotide

• Length: 954 bp

>NTDB_id=45177 BAMTA208_RS11520 WP_013351813.1 2302826..2303779(-) (med) [Bacillus amyloliquefaciens TA208]
TTGATCACCAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGCGGGTGCGCACAAACTCCGTTTAAAGGAAAAAT
TGAGAAGGTCGGAATGCTTTTTCCCGATACCATCAGTGACCTGGTATGGGGCACAAAAGGTTACAAAGGTTTATTAGCGA
TACAATCTGAATTTAACGTTGACGTTTATTATAAAGAAAATATCAGATCTGATGAAGATATTTTAAAAGCGATAGATGAT
TTGCATAAAAAAGGAGTCAATCTTTTATACGGGCACGGAAATGAATACGAGGAAATCTTCAATATGATCAGCAAGGATTA
TCCCGATATGGAGTTCGTCGTCGCAAACGGAACGGCGAAAAACGATAATGTCACAAGCGTTCATCTCATGGGAGAAGCGA
TGGGCTTTTTCGGGGGAATGACGGCTGCCCATATGTCAAAAACCAATGAGGTCGGCGTCATCGCCTCGTTCTTATGGCAG
CCTGAAGTAGACGGCTTTATCAAAGGGGCGAAATACGAAAATCCCGATATCACCGTCAATACTGAATTTACGGACCACTG
GGATAACGGCAATGAAGCGCTGCATCTTTACGAGAAGTTAAAAGCGGAAGGCACGGATGTTGTGTATCCGGCCGGAGACG
GGTATAATGTTCCTGTCATTCAGCAAATCAAAAAAGACGGGCTTTACGCCATCGGCTATGTCGCCGAGCAATCGTATCTC
GGCAAAAACACGGTGCTGACAAGCACCGTGCAAAATGTAGACAAAGCTTATACATTAATCGCCGAGCAATATAATAAAGG
TACGCTCAAGAGCGGAGATCACAACTTCGATTTCAGGGAAGGAGTCGTTGAAATGGGGACGTTCAGCCCTTTGGTGGACA
AAGCCTTTCAAGACAAAATCTCAGACCTTGTAAAAACGTATAACCAAACAAATGAACTGCCGTCAAATGAATAG

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (27-317)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	78.549	100	0.785