Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   HRH33_RS25340 Genome accession   NZ_CP054205
Coordinates   5580843..5581250 (-) Length   135 a.a.
NCBI ID   WP_034101259.1    Uniprot ID   A0A2G0WM48
Organism   Pseudomonas rhodesiae strain NL2019     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 5575843..5586250
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HRH33_RS25325 (HRH33_25325) - 5577845..5579896 (-) 2052 WP_167417840.1 methyl-accepting chemotaxis protein -
  HRH33_RS25330 (HRH33_25330) - 5579893..5580417 (-) 525 WP_034101257.1 chemotaxis protein CheW -
  HRH33_RS25335 (HRH33_25335) pilH 5580430..5580795 (-) 366 WP_034101258.1 twitching motility response regulator PilH -
  HRH33_RS25340 (HRH33_25340) pilG 5580843..5581250 (-) 408 WP_034101259.1 twitching motility response regulator PilG Regulator
  HRH33_RS25345 (HRH33_25345) gshB 5581489..5582460 (+) 972 WP_167417841.1 glutathione synthase -
  HRH33_RS25350 (HRH33_25350) - 5583187..5584092 (+) 906 WP_034139909.1 energy transducer TonB -
  HRH33_RS25355 (HRH33_25355) - 5584147..5584716 (+) 570 WP_034139671.1 YqgE/AlgH family protein -
  HRH33_RS25360 (HRH33_25360) ruvX 5584716..5585153 (+) 438 WP_003176676.1 Holliday junction resolvase RuvX -
  HRH33_RS25365 (HRH33_25365) pyrR 5585236..5585742 (+) 507 WP_034139672.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14890.40 Da        Isoelectric Point: 7.3842

>NTDB_id=451441 HRH33_RS25340 WP_034101259.1 5580843..5581250(-) (pilG) [Pseudomonas rhodesiae strain NL2019]
MEQHSNALRVMVIDDSKTIRRTAETLLKNVGCDVITAIDGFDALARIVDHHPHIIFVDIMMPRLDGYQTCALVKNNPAFK
AIPVIMLSSKDGLFDKAKGRIVGVDQFLTKPFSKEELLGAIKAYVPGFAAVEQAH

Nucleotide


Download         Length: 408 bp        

>NTDB_id=451441 HRH33_RS25340 WP_034101259.1 5580843..5581250(-) (pilG) [Pseudomonas rhodesiae strain NL2019]
ATGGAACAGCATTCCAACGCCTTGAGAGTGATGGTGATCGACGATTCGAAAACGATCCGCCGCACCGCCGAGACGCTGTT
GAAGAACGTGGGGTGCGATGTCATTACGGCCATCGACGGTTTCGATGCCCTGGCGCGGATCGTGGATCATCACCCGCACA
TCATCTTTGTCGACATCATGATGCCGCGCCTGGATGGCTATCAGACCTGCGCGCTGGTGAAGAACAACCCGGCGTTCAAG
GCGATCCCGGTGATCATGCTGTCGTCCAAGGACGGCCTGTTCGATAAGGCCAAGGGACGCATCGTGGGGGTCGATCAGTT
TTTGACCAAGCCTTTCAGCAAGGAAGAACTGCTGGGTGCAATCAAGGCCTATGTGCCTGGGTTCGCCGCAGTGGAACAAG
CACACTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2G0WM48

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

70.4

92.593

0.652
  vicR Streptococcus mutans UA159

38.889

93.333

0.363