Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   HR084_RS06105 Genome accession   NZ_CP054177
Coordinates   1186716..1186907 (+) Length   63 a.a.
NCBI ID   WP_003224559.1    Uniprot ID   G4NWD2
Organism   Bacillus subtilis strain JCL16     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1181716..1191907
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HR084_RS06075 (HR084_06075) argF 1182581..1183540 (+) 960 WP_038428782.1 ornithine carbamoyltransferase -
  HR084_RS06080 (HR084_06080) yjzC 1183626..1183805 (+) 180 WP_003245356.1 YjzC family protein -
  HR084_RS06085 (HR084_06085) yjzD 1183851..1184036 (-) 186 WP_029317607.1 DUF2929 domain-containing protein -
  HR084_RS06090 (HR084_06090) - 1184285..1185019 (+) 735 WP_032721340.1 hypothetical protein -
  HR084_RS06095 (HR084_06095) - 1185101..1185658 (+) 558 WP_038428783.1 hypothetical protein -
  HR084_RS06100 (HR084_06100) med 1185748..1186701 (+) 954 WP_032721344.1 transcriptional regulator Med Regulator
  HR084_RS06105 (HR084_06105) comZ 1186716..1186907 (+) 192 WP_003224559.1 ComG operon transcriptional repressor ComZ Regulator
  HR084_RS06110 (HR084_06110) yjzB 1186937..1187176 (-) 240 WP_003232972.1 spore coat protein YjzB -
  HR084_RS06115 (HR084_06115) fabH 1187341..1188279 (+) 939 WP_003232971.1 beta-ketoacyl-ACP synthase III -
  HR084_RS06120 (HR084_06120) fabF 1188302..1189543 (+) 1242 WP_003244890.1 beta-ketoacyl-ACP synthase II -
  HR084_RS06125 (HR084_06125) yjaZ 1189619..1190404 (+) 786 WP_038428784.1 DUF2268 domain-containing protein -
  HR084_RS06130 (HR084_06130) appD 1190596..1191582 (+) 987 WP_003232965.1 oligopeptide ABC transporter ATP-binding protein AppD -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7214.27 Da        Isoelectric Point: 4.2564

>NTDB_id=451311 HR084_RS06105 WP_003224559.1 1186716..1186907(+) (comZ) [Bacillus subtilis strain JCL16]
MQHEKSLEFLQIAMKYLPEAKEQLEKSGIELSMEAIQPFMNLFTTVMAEAYELGKSDAKSETE

Nucleotide


Download         Length: 192 bp        

>NTDB_id=451311 HR084_RS06105 WP_003224559.1 1186716..1186907(+) (comZ) [Bacillus subtilis strain JCL16]
ATGCAGCACGAAAAATCACTTGAATTCTTGCAAATTGCCATGAAATATCTCCCTGAAGCGAAAGAACAGCTTGAGAAATC
AGGCATTGAGCTCTCAATGGAGGCCATCCAGCCGTTTATGAATCTATTTACAACGGTAATGGCGGAAGCTTATGAGCTTG
GCAAGTCTGACGCTAAATCTGAAACAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NWD2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

100

100

1