Detailed information NTG0451310

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: HR084_RS06100
• Genome accession: NZ_CP054177
• Coordinates: 1185748..1186701 (+)
• Length: 317 a.a.
• NCBI ID: WP_032721344.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain JCL16
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 1180748..1191701

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HR084_RS06075 (HR084_06075)	argF	1182581..1183540 (+)	960	WP_038428782.1	ornithine carbamoyltransferase	-
HR084_RS06080 (HR084_06080)	yjzC	1183626..1183805 (+)	180	WP_003245356.1	YjzC family protein	-
HR084_RS06085 (HR084_06085)	yjzD	1183851..1184036 (-)	186	WP_029317607.1	DUF2929 domain-containing protein	-
HR084_RS06090 (HR084_06090)	-	1184285..1185019 (+)	735	WP_032721340.1	hypothetical protein	-
HR084_RS06095 (HR084_06095)	-	1185101..1185658 (+)	558	WP_038428783.1	hypothetical protein	-
HR084_RS06100 (HR084_06100)	med	1185748..1186701 (+)	954	WP_032721344.1	transcriptional regulator Med	Regulator
HR084_RS06105 (HR084_06105)	comZ	1186716..1186907 (+)	192	WP_003224559.1	ComG operon transcriptional repressor ComZ	Regulator
HR084_RS06110 (HR084_06110)	yjzB	1186937..1187176 (-)	240	WP_003232972.1	spore coat protein YjzB	-
HR084_RS06115 (HR084_06115)	fabH	1187341..1188279 (+)	939	WP_003232971.1	beta-ketoacyl-ACP synthase III	-
HR084_RS06120 (HR084_06120)	fabF	1188302..1189543 (+)	1242	WP_003244890.1	beta-ketoacyl-ACP synthase II	-
HR084_RS06125 (HR084_06125)	yjaZ	1189619..1190404 (+)	786	WP_038428784.1	DUF2268 domain-containing protein	-
HR084_RS06130 (HR084_06130)	appD	1190596..1191582 (+)	987	WP_003232965.1	oligopeptide ABC transporter ATP-binding protein AppD	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 35323.84 Da
• Isoelectric Point: 4.6031

>NTDB_id=451310 HR084_RS06100 WP_032721344.1 1185748..1186701(+) (med) [Bacillus subtilis strain JCL16]
MITRLVMIFSVLLLLSGCGQTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLNIQSKYNVDVYYKEGVKTEEDIINAIED
FHKRGVNLLYGHGSEYAEVFNLVGEDYPDMEFVISNAKAKADNVTSVHFSGEAMGFFGGMTAAHMSKTNQVGVIASFTWQ
PEVDGFIKGAKYENPDIEVNTKYTDHWDDDTTAVKLYQKMKNEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDL
GENTVLTSTVQNVDKAYEIIAEQFNKGNLEGGDHYYDLNTGVVEMGTFSPLVDKDFQQRIAKLIKTYNKTGELPKNE

Nucleotide

• Length: 954 bp

>NTDB_id=451310 HR084_RS06100 WP_032721344.1 1185748..1186701(+) (med) [Bacillus subtilis strain JCL16]
TTGATCACAAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGTGGATGTGGACAAACTCCGTTCAAAGGAAAAAT
TGAGAAGGTCGGCATGCTCTTTCCTGATACGATTAATGACCTCGTATGGGGCACAAAAGGGTATAAAGGATTACTGAATA
TACAATCCAAATACAATGTGGACGTCTATTATAAAGAAGGCGTTAAAACAGAAGAAGATATCATAAATGCGATTGAGGAT
TTTCATAAGAGGGGCGTCAATCTGCTCTACGGCCATGGGAGTGAATATGCTGAGGTGTTTAACTTGGTCGGCGAAGATTA
TCCAGATATGGAATTCGTCATTTCCAATGCGAAAGCGAAAGCTGATAATGTAACGAGTGTCCATTTTAGCGGGGAAGCAA
TGGGCTTTTTTGGAGGAATGACTGCTGCCCATATGTCGAAAACGAATCAGGTCGGTGTAATTGCTTCCTTTACGTGGCAG
CCTGAGGTTGACGGTTTTATCAAAGGGGCCAAGTATGAAAATCCGGATATAGAGGTAAATACGAAATATACGGATCATTG
GGATGATGATACAACAGCAGTAAAGCTTTATCAGAAAATGAAGAACGAAGGCGCGGATGTTGTGTATCCCGCCGGAGACG
GGTATAATGTTCCTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATTGGCTACGTCACAGATCAATCGGATCTG
GGGGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAATAAAGG
CAACCTTGAGGGCGGCGATCATTACTACGACCTGAATACGGGAGTCGTTGAGATGGGAACATTCAGCCCGCTCGTCGACA
AAGACTTTCAGCAAAGAATCGCCAAGCTGATCAAAACATACAACAAAACAGGCGAGCTGCCAAAAAACGAGTAA

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (27-317)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	99.369	100	0.994