Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   HR084_RS02220 Genome accession   NZ_CP054177
Coordinates   434272..435222 (+) Length   316 a.a.
NCBI ID   WP_014475804.1    Uniprot ID   A0A0C3FBZ6
Organism   Bacillus subtilis strain JCL16     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 429272..440222
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HR084_RS02195 (HR084_02195) rapC 430731..431879 (+) 1149 WP_024571686.1 response regulator aspartate phosphatase RapC Regulator
  HR084_RS02200 (HR084_02200) phrC 431863..431985 (+) 123 WP_003224994.1 phosphatase RapC inhibitor PhrC Regulator
  HR084_RS02205 (HR084_02205) yczM 432085..432174 (-) 90 WP_015482794.1 YjcZ family sporulation protein -
  HR084_RS02210 (HR084_02210) yczN 432256..432369 (-) 114 WP_003234495.1 YjcZ family sporulation protein -
  HR084_RS02215 (HR084_02215) thrD 432523..433887 (-) 1365 WP_153255669.1 aspartate kinase -
  HR084_RS02220 (HR084_02220) ceuB 434272..435222 (+) 951 WP_014475804.1 petrobactin ABC transporter permease YclN Machinery gene
  HR084_RS02225 (HR084_02225) yclO 435215..436162 (+) 948 WP_173613905.1 petrobactin ABC transporter permease YclO -
  HR084_RS02230 (HR084_02230) yclP 436156..436914 (+) 759 WP_014475806.1 petrobactin ABC transporter ATP-binding protein YclP -
  HR084_RS02235 (HR084_02235) yclQ 436936..437889 (+) 954 WP_173613906.1 petrobactin ABC transporter substrate-binding protein YclQ -
  HR084_RS02240 (HR084_02240) cdaE 437936..439354 (-) 1419 WP_003234482.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34871.27 Da        Isoelectric Point: 9.9364

>NTDB_id=451300 HR084_RS02220 WP_014475804.1 434272..435222(+) (ceuB) [Bacillus subtilis strain JCL16]
MKLRYLFILLIILAVTSVFIGVEDLSPLDLFDLSKQEASTLFASRLPRLISIVIAGLSMSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLLLFTSASPLIKMLVAFVFALAGNFLFMKILERIKFNDTIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNVSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTLAGMGESFSVNLGLKYKRVVNIGLIIVSLITSLVILTVGM
LPFLGLIIPNIVSIYRGDNLKSSLPHTALLGAVFVLFCDILGRIIIFPYEISIGLMVGIIGSGIFLFMLLRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=451300 HR084_RS02220 WP_014475804.1 434272..435222(+) (ceuB) [Bacillus subtilis strain JCL16]
ATGAAGCTACGTTACTTATTTATTCTACTTATCATATTAGCAGTCACATCTGTATTTATCGGTGTAGAAGATCTGTCGCC
GCTTGATCTCTTCGATTTAAGCAAACAAGAGGCGTCAACGCTGTTTGCAAGCCGTTTGCCGCGATTGATCAGCATTGTCA
TCGCGGGATTAAGCATGAGCATCTGCGGTTTGATTATGCAGCAGATCAGCAGAAATAAATTCGTGTCACCGACGACGGCG
GGCACGATGGATTGGGCGAGGCTCGGCATTTTAATTTCCTTGCTGCTGTTTACATCCGCCAGTCCTTTAATCAAAATGCT
GGTCGCGTTTGTCTTTGCCCTTGCAGGAAATTTTCTGTTTATGAAAATCCTTGAAAGAATCAAGTTTAACGACACCATCT
TTATTCCGCTTGTCGGTTTAATGCTCGGGAATATCGTCAGTTCAATCGCGACATTTATCGCATATAAATATGACTTGATC
CAGAATGTGTCATCATGGCTGCAGGGAGACTTCTCTTTAGTCGTGAAAGGAAGATACGAGCTTCTTTATCTGAGTATTCC
GCTCGTCATCATTGCCTATGTGTATGCGGATAAATTCACATTGGCCGGTATGGGTGAAAGCTTTTCTGTCAACCTCGGCC
TCAAGTACAAACGGGTTGTGAACATCGGGCTCATTATCGTGTCCCTGATCACGTCTCTTGTCATTTTGACTGTCGGTATG
CTGCCGTTTCTCGGTTTAATCATCCCGAATATTGTATCGATTTACAGAGGAGACAATCTGAAGAGCAGCCTGCCGCATAC
TGCGCTGTTGGGAGCGGTGTTTGTGCTATTTTGCGATATACTGGGCAGAATCATTATCTTCCCTTATGAAATCTCGATTG
GCCTGATGGTCGGAATCATCGGCAGCGGCATTTTCCTGTTTATGCTGTTAAGGAGAAAAGCCTATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0C3FBZ6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.532

100

0.525