Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   HRE60_RS09845 Genome accession   NZ_CP054153
Coordinates   2142858..2143625 (+) Length   255 a.a.
NCBI ID   WP_038676938.1    Uniprot ID   A0A448AFJ8
Organism   Streptococcus salivarius strain DB-B5     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2137858..2148625
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HRE60_RS09830 (HRE60_09830) - 2140172..2140855 (-) 684 WP_013991345.1 YoaK family protein -
  HRE60_RS09835 (HRE60_09835) rlmH 2140871..2141350 (-) 480 WP_002887123.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  HRE60_RS09840 (HRE60_09840) htrA 2141556..2142791 (+) 1236 WP_002883958.1 trypsin-like peptidase domain-containing protein Regulator
  HRE60_RS09845 (HRE60_09845) spo0J 2142858..2143625 (+) 768 WP_038676938.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence

Protein


Download         Length: 255 a.a.        Molecular weight: 29362.87 Da        Isoelectric Point: 9.7279

>NTDB_id=451202 HRE60_RS09845 WP_038676938.1 2142858..2143625(+) (spo0J) [Streptococcus salivarius strain DB-B5]
MQEQLKALPISDIYPNPFQPRIEFSDEELAELSQSIAENGLIQPIIVRKSDIIGYELIAGERRLRACKRLGMTEIPAVVK
KVTDQESRKQAIIENLQRSNLNPIEEAKAYRSLINELAYSHEELAKAMGKSRPYISNALRLLQLPQEIQTSIENGKLSQG
HARALLAVEDTKKQLTIYHQVLTEKWSVRTLEKRLQELPKKQKSKKDIHIKDKEKELEKSLGLPVTLRYHKNHSGTIQIH
FSTEEDFNRIINKLI

Nucleotide


Download         Length: 768 bp        

>NTDB_id=451202 HRE60_RS09845 WP_038676938.1 2142858..2143625(+) (spo0J) [Streptococcus salivarius strain DB-B5]
ATGCAAGAACAACTCAAAGCTTTACCTATTAGTGACATCTATCCCAATCCTTTTCAACCTCGTATAGAGTTCTCTGATGA
AGAATTAGCGGAGCTAAGCCAATCGATTGCAGAAAATGGACTGATACAGCCAATCATTGTCCGAAAATCGGATATTATTG
GTTATGAACTAATTGCTGGGGAAAGACGTTTACGTGCCTGTAAACGTCTAGGAATGACAGAAATCCCTGCAGTTGTAAAG
AAAGTTACAGATCAAGAAAGCCGTAAACAAGCTATTATTGAAAATTTACAACGATCGAATCTCAATCCCATTGAAGAAGC
AAAGGCCTATCGTAGTTTAATTAATGAGCTAGCTTATAGTCACGAGGAACTGGCGAAAGCTATGGGGAAATCCAGACCTT
ATATCAGTAACGCTCTCAGACTCCTCCAACTTCCCCAAGAGATACAGACGAGTATCGAAAATGGCAAACTGAGTCAAGGA
CATGCTAGAGCACTTTTAGCTGTTGAGGATACAAAAAAGCAATTAACTATCTATCATCAGGTCCTTACTGAAAAATGGTC
AGTTCGTACCCTGGAAAAAAGACTTCAAGAACTTCCAAAAAAACAAAAATCAAAAAAAGATATTCATATAAAAGATAAAG
AAAAAGAACTTGAAAAATCACTTGGTCTCCCTGTTACTCTTCGTTATCACAAAAATCACTCTGGAACTATTCAGATCCAC
TTTTCGACAGAAGAAGATTTTAACAGAATTATCAACAAGCTTATTTGA

Domains

Predicted by InterproScan.

ParB/Sulfiredoxin domain (ParB_N)

(8-95)

HTH domain found in ParB protein (HTH_ParB)

(146-196)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A448AFJ8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

58.039

100

0.58