Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrR   Type   Regulator
Locus tag   HRE60_RS01940 Genome accession   NZ_CP054153
Coordinates   374294..374737 (+) Length   147 a.a.
NCBI ID   WP_002885568.1    Uniprot ID   A0A0A1DW04
Organism   Streptococcus salivarius strain DB-B5     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 369294..379737
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HRE60_RS01925 (HRE60_01925) gdhA 370409..371761 (+) 1353 WP_181670957.1 NADP-specific glutamate dehydrogenase -
  HRE60_RS01930 (HRE60_01930) - 371964..373607 (+) 1644 WP_181670958.1 hypothetical protein -
  HRE60_RS01935 (HRE60_01935) - 373698..374108 (+) 411 WP_060972073.1 peptide deformylase -
  HRE60_RS01940 (HRE60_01940) rcrR 374294..374737 (+) 444 WP_002885568.1 MarR family transcriptional regulator Regulator
  HRE60_RS01945 (HRE60_01945) rcrP 374741..376555 (+) 1815 WP_073687172.1 ABC transporter ATP-binding protein Regulator
  HRE60_RS01950 (HRE60_01950) rcrQ 376545..378323 (+) 1779 WP_037612017.1 ABC transporter ATP-binding protein Regulator
  HRE60_RS01955 (HRE60_01955) - 378431..379054 (+) 624 WP_181670959.1 GNAT family N-acetyltransferase -

Sequence

Protein


Download         Length: 147 a.a.        Molecular weight: 17181.67 Da        Isoelectric Point: 9.3639

>NTDB_id=451154 HRE60_RS01940 WP_002885568.1 374294..374737(+) (rcrR) [Streptococcus salivarius strain DB-B5]
MHGKDTFSEFREFINTMESRVQELGKVHGVEHLAGPQGFAVKYLSDNQDKEIFIKDIEKRLCISKSVASNLVKRMEKNGF
VELVTSDKDKRYKYVHLTDLGKKKARDVKHFREAIHEQLLEGISKEDAETAFRVFHQIRMNLEKNKE

Nucleotide


Download         Length: 444 bp        

>NTDB_id=451154 HRE60_RS01940 WP_002885568.1 374294..374737(+) (rcrR) [Streptococcus salivarius strain DB-B5]
ATGCATGGAAAAGATACTTTTAGTGAATTCAGAGAATTCATCAATACTATGGAATCTCGCGTGCAAGAGTTAGGAAAGGT
CCATGGGGTTGAGCATTTAGCTGGCCCTCAAGGATTTGCTGTCAAGTATTTGTCTGACAATCAAGATAAAGAAATCTTTA
TCAAAGACATTGAAAAAAGACTATGTATTTCTAAATCAGTGGCTAGTAATTTGGTCAAACGAATGGAAAAAAATGGTTTT
GTTGAGTTGGTGACATCGGACAAGGATAAACGCTACAAGTATGTTCATCTGACAGACTTAGGTAAAAAGAAAGCTCGAGA
TGTCAAACATTTTCGAGAGGCCATCCATGAACAGCTGTTAGAAGGTATTTCCAAAGAAGATGCTGAAACAGCCTTTCGTG
TCTTTCACCAAATTCGTATGAATTTAGAAAAAAATAAGGAGTAA

Domains

Predicted by InterproScan.

MarR family (MarR_2)

(37-91)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0A1DW04

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrR Streptococcus mutans UA159

58.156

95.918

0.558