Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   HRE60_RS01950 Genome accession   NZ_CP054153
Coordinates   376545..378323 (+) Length   592 a.a.
NCBI ID   WP_037612017.1    Uniprot ID   A0AB33ZBA9
Organism   Streptococcus salivarius strain DB-B5     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 371545..383323
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HRE60_RS01930 (HRE60_01930) - 371964..373607 (+) 1644 WP_181670958.1 hypothetical protein -
  HRE60_RS01935 (HRE60_01935) - 373698..374108 (+) 411 WP_060972073.1 peptide deformylase -
  HRE60_RS01940 (HRE60_01940) rcrR 374294..374737 (+) 444 WP_002885568.1 MarR family transcriptional regulator Regulator
  HRE60_RS01945 (HRE60_01945) rcrP 374741..376555 (+) 1815 WP_073687172.1 ABC transporter ATP-binding protein Regulator
  HRE60_RS01950 (HRE60_01950) rcrQ 376545..378323 (+) 1779 WP_037612017.1 ABC transporter ATP-binding protein Regulator
  HRE60_RS01955 (HRE60_01955) - 378431..379054 (+) 624 WP_181670959.1 GNAT family N-acetyltransferase -
  HRE60_RS01960 (HRE60_01960) - 379202..379825 (+) 624 WP_002890107.1 GTP pyrophosphokinase family protein -
  HRE60_RS01965 (HRE60_01965) - 379827..380504 (+) 678 WP_181670960.1 response regulator transcription factor -
  HRE60_RS01970 (HRE60_01970) - 380518..381741 (+) 1224 WP_181670961.1 HAMP domain-containing sensor histidine kinase -
  HRE60_RS01975 (HRE60_01975) pyrH 381978..382715 (+) 738 WP_002885551.1 UMP kinase -
  HRE60_RS01980 (HRE60_01980) frr 382730..383287 (+) 558 WP_002885567.1 ribosome recycling factor -

Sequence

Protein


Download         Length: 592 a.a.        Molecular weight: 65116.07 Da        Isoelectric Point: 5.0198

>NTDB_id=451156 HRE60_RS01950 WP_037612017.1 376545..378323(+) (rcrQ) [Streptococcus salivarius strain DB-B5]
MENKPKTSSYKRLKPYIKGFQIPFVLAIFGAIISAVITVIGPDKLKEITNTITEGITPTKMGTIPGIDLDKVASIAMTLA
VLYAISAIVGYLQSFTVATVTQRFSQRFRTAIQKKINSVPLNYFDSHSQGDTLSRVTNDVDLLGQSLSQGLGTLITSSVL
LVAAIIMMFYSNVTMAFTAIGSVLIGFVLVAFIMGFSQPLFKRQQENLANINGYIEEIYTGQAVVTSYNAAQESSQAFKG
LNDKLYKSMWQSQFISGIMMPLMIFIGNFGYVMVCLVGAIKVIDGSLTIGDVVAFMTYVRIFSQPLSQIAQGITQLQSAT
AAIGRIFEFLEEKDMDDESAKTAELTDTKGQVVFDHVSFGYTPEKTIIHDFSALAKPGQKIAIVGPTGAGKTTIVNLLMK
FYNIDQGRITIDGVDTNDMKRETVHDQFSMVLQDTWLFEGTIRDNLIYNQENISDEQVIAAAKAVGVHHFITTLPKGYDT
YLDDSVTLSVGQKQLLTIARALLKDAPLLILDEATSSVDTRTEELIQKAMDKLMEGRTSFVIAHRLSTIRNADLILVMKD
GNIIEQGNHDELMAADGFYADLYNSQFTEEVA

Nucleotide


Download         Length: 1779 bp        

>NTDB_id=451156 HRE60_RS01950 WP_037612017.1 376545..378323(+) (rcrQ) [Streptococcus salivarius strain DB-B5]
ATGGAAAATAAGCCAAAAACATCATCCTATAAACGCTTAAAACCCTATATTAAAGGTTTCCAAATTCCGTTTGTCCTTGC
GATTTTTGGAGCAATTATTTCAGCGGTCATTACAGTTATTGGACCAGATAAGCTTAAAGAAATTACCAATACTATTACTG
AGGGTATCACACCTACAAAAATGGGGACGATTCCAGGCATTGATTTGGACAAGGTAGCAAGTATTGCTATGACCTTGGCT
GTTCTCTATGCCATTTCAGCCATTGTGGGTTACCTACAAAGCTTTACGGTTGCGACAGTTACACAACGCTTTTCACAACG
TTTCCGTACAGCTATCCAAAAGAAAATCAACAGTGTCCCTCTTAATTATTTCGATAGTCACTCTCAAGGGGATACCCTCT
CTCGTGTGACCAATGACGTTGACCTTTTGGGACAATCGCTTAGCCAAGGCTTAGGTACCTTGATTACTTCAAGTGTTCTC
TTGGTGGCAGCCATTATTATGATGTTCTACTCAAATGTCACTATGGCTTTCACTGCGATTGGTTCTGTCTTGATAGGTTT
TGTTCTGGTAGCCTTTATCATGGGCTTCTCACAACCCCTTTTCAAGCGCCAACAAGAAAATTTGGCTAATATTAATGGTT
ATATTGAAGAAATCTACACAGGTCAAGCAGTCGTAACGAGTTACAATGCCGCTCAAGAAAGCAGTCAGGCTTTCAAGGGG
CTTAATGATAAACTCTATAAATCGATGTGGCAATCACAGTTTATCTCAGGTATTATGATGCCACTTATGATTTTCATTGG
GAACTTTGGTTATGTCATGGTCTGTCTTGTGGGTGCCATCAAAGTTATTGATGGTAGCTTGACGATTGGAGATGTGGTGG
CCTTCATGACCTATGTTCGTATCTTCTCCCAACCTCTTTCTCAAATTGCACAAGGGATTACACAACTCCAATCAGCTACT
GCAGCCATTGGTCGTATCTTTGAATTTTTGGAAGAAAAAGATATGGACGACGAGTCAGCTAAGACAGCTGAGTTGACAGA
TACTAAAGGTCAAGTAGTCTTTGACCATGTTTCCTTTGGTTATACTCCTGAAAAGACTATTATTCATGACTTTTCAGCTC
TTGCTAAGCCAGGTCAAAAGATTGCGATCGTTGGTCCAACAGGTGCTGGTAAGACGACTATTGTTAACCTGCTTATGAAG
TTCTATAACATCGACCAAGGTCGTATCACCATTGACGGTGTGGATACTAATGACATGAAGCGTGAAACCGTTCATGACCA
ATTCTCTATGGTGCTTCAAGACACTTGGCTCTTTGAAGGTACTATTCGTGATAATTTGATTTACAACCAAGAGAATATTT
CTGATGAGCAAGTTATTGCTGCAGCCAAGGCTGTCGGTGTTCACCACTTCATCACCACACTTCCAAAGGGTTATGATACT
TATTTGGATGATTCTGTGACCTTGTCAGTTGGTCAGAAACAGCTCTTGACCATTGCGCGTGCGCTTCTTAAGGATGCCCC
TCTTCTTATCTTGGATGAAGCGACATCATCAGTTGACACCCGAACAGAAGAGTTGATTCAAAAAGCCATGGACAAGCTTA
TGGAAGGCCGGACTTCCTTTGTCATTGCCCACCGCTTATCAACCATTCGAAATGCTGACCTTATCCTTGTGATGAAAGAT
GGTAACATTATTGAACAGGGCAATCATGATGAGCTCATGGCAGCAGATGGTTTCTATGCTGATCTTTATAATAGTCAATT
TACAGAAGAAGTTGCCTAA

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(25-306)

ABC transporter (ABC_tran)

(371-516)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

69.088

100

0.691