Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilH   Type   Machinery gene
Locus tag   I6G27_RS02810 Genome accession   NZ_CP065751
Coordinates   620012..620374 (+) Length   120 a.a.
NCBI ID   WP_036592735.1    Uniprot ID   A0A0X8K6G7
Organism   Moraxella osloensis strain FDAARGOS_870     
Function   type IV pilus biogenesis and function (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 615012..625374
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6G27_RS02800 (I6G27_02800) - 617652..618899 (-) 1248 WP_197931440.1 efflux RND transporter periplasmic adaptor subunit -
  I6G27_RS02805 (I6G27_02805) pilG 619390..619776 (+) 387 WP_062332554.1 twitching motility response regulator PilG Regulator
  I6G27_RS02810 (I6G27_02810) pilH 620012..620374 (+) 363 WP_036592735.1 PleD family two-component system response regulator Machinery gene
  I6G27_RS02815 (I6G27_02815) - 620380..620916 (+) 537 WP_062332551.1 chemotaxis protein CheW -
  I6G27_RS02820 (I6G27_02820) - 621339..622370 (+) 1032 Protein_548 methyl-accepting chemotaxis protein -
  I6G27_RS02825 (I6G27_02825) - 622608..622919 (+) 312 WP_062332548.1 hypothetical protein -
  I6G27_RS02830 (I6G27_02830) - 622876..623472 (+) 597 WP_167541438.1 CheR family methyltransferase -

Sequence

Protein


Download         Length: 120 a.a.        Molecular weight: 13700.74 Da        Isoelectric Point: 5.6757

>NTDB_id=451086 I6G27_RS02810 WP_036592735.1 620012..620374(+) (pilH) [Moraxella osloensis strain FDAARGOS_870]
MAKILVVDDSPSEMAKFRDILTRHQYEVIEAHTGDDGIQKANEFFPDVILMDVVMPEMNGFQATRKLTRDPKTSHIPVVI
ISTKNQETDRVWGKRQGARDYLSKPITEEALITVIRSVME

Nucleotide


Download         Length: 363 bp        

>NTDB_id=451086 I6G27_RS02810 WP_036592735.1 620012..620374(+) (pilH) [Moraxella osloensis strain FDAARGOS_870]
ATGGCCAAAATCTTAGTAGTTGATGATTCACCATCAGAAATGGCAAAATTTCGGGATATTTTGACCCGACATCAGTACGA
AGTCATTGAAGCGCATACAGGCGATGATGGCATTCAAAAAGCCAATGAGTTTTTCCCAGACGTGATTTTGATGGATGTGG
TCATGCCAGAGATGAACGGCTTTCAAGCGACCCGCAAACTCACCCGTGACCCAAAAACCAGTCATATCCCTGTCGTCATC
ATCAGTACTAAAAACCAAGAAACTGACCGGGTATGGGGCAAGCGCCAAGGCGCACGAGATTATCTAAGTAAGCCGATTAC
AGAAGAAGCCTTAATCACTGTAATCCGTTCCGTGATGGAGTAG

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(4-115)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0X8K6G7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilH Synechocystis sp. PCC 6803

38.655

99.167

0.383