Detailed information    

insolico Bioinformatically predicted

Overview

Name   uvrC   Type   Machinery gene
Locus tag   I6G27_RS01400 Genome accession   NZ_CP065751
Coordinates   311407..313284 (-) Length   625 a.a.
NCBI ID   WP_062333150.1    Uniprot ID   A0A378QBX2
Organism   Moraxella osloensis strain FDAARGOS_870     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 306407..318284
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6G27_RS01380 (I6G27_01380) - 307660..308415 (-) 756 WP_062333162.1 DUF3800 domain-containing protein -
  I6G27_RS01385 (I6G27_01385) fabF 308555..309856 (+) 1302 WP_062333159.1 beta-ketoacyl-ACP synthase II -
  I6G27_RS01390 (I6G27_01390) - 310003..310986 (+) 984 WP_062333157.1 hypothetical protein -
  I6G27_RS01395 (I6G27_01395) - 310983..311339 (-) 357 WP_062333153.1 YkgJ family cysteine cluster protein -
  I6G27_RS01400 (I6G27_01400) uvrC 311407..313284 (-) 1878 WP_062333150.1 excinuclease ABC subunit UvrC Machinery gene
  I6G27_RS01405 (I6G27_01405) - 313534..313917 (-) 384 WP_062333147.1 HNH endonuclease -
  I6G27_RS01410 (I6G27_01410) - 314025..314615 (+) 591 WP_062333146.1 DUF4442 domain-containing protein -
  I6G27_RS01415 (I6G27_01415) - 314626..315231 (-) 606 WP_062333143.1 class I SAM-dependent methyltransferase -
  I6G27_RS01420 (I6G27_01420) - 315482..315949 (-) 468 WP_062333140.1 hypothetical protein -
  I6G27_RS01425 (I6G27_01425) hemN 315962..317440 (-) 1479 WP_062333137.1 oxygen-independent coproporphyrinogen III oxidase -

Sequence

Protein


Download         Length: 625 a.a.        Molecular weight: 69948.50 Da        Isoelectric Point: 9.4524

>NTDB_id=451073 I6G27_RS01400 WP_062333150.1 311407..313284(-) (uvrC) [Moraxella osloensis strain FDAARGOS_870]
MPKNKTPSIDPATIEIAAATADRKARLDHLIKRLPNLPGVYKMLGKNGDIIYVGKAKSLKSRVNSYFAKTIDHPKTRALV
QRIDNIETIITRSETEALLLEQNLIKLHRPPYNVLLRDDKSYLYVFISADKPYPRLAYGRGKGQHQKGRFFGPFPSAHAA
KQTLLMMQKMFMVRQCTNAFFAQRQRPCLEYQIKRCKAPCVGLVSPEEYADDVNNTIRFLKGEGTDLQVKLVGKMEQAAE
DMNFEQAALYRDQLSMLREVQAKQAVYTVKGEADIIAIASQAGITCVHVMNVRNGQVLGGNNYFPDVDSENDIADNLSEF
VSSFYFQVSDDLPEELIISHELPDQTAMTEALTETFGKKVTIKTKVREQRSEWLTLAQMNANNALQTKLGDYLEVKSRFN
ALNAVLKEALQGKSLDRIECFDISHTMGEATIASCVVADQGGLRKRDYRQYAIHGITGGDDYAAMKQVLNRRYSKQPLPD
LLLIDGGKGQLNMAKDVLSELGILTQTLLVGVAKGEGRKAGLEVLHFIDREPLDLPADSKALHLIMHIRDEAHRFAITAH
RKKRDKRRSSSVLEAIPGLGEKRRRELLNHFGGLQQLLGASQDEIGQVNGIGKVMANTIYKVLHG

Nucleotide


Download         Length: 1878 bp        

>NTDB_id=451073 I6G27_RS01400 WP_062333150.1 311407..313284(-) (uvrC) [Moraxella osloensis strain FDAARGOS_870]
ATGCCAAAAAACAAAACGCCCAGTATCGACCCTGCAACCATTGAAATTGCTGCAGCGACTGCCGACCGCAAAGCGCGATT
GGATCACTTGATTAAGCGCCTGCCCAACTTGCCAGGCGTGTACAAAATGCTGGGCAAAAATGGCGACATCATCTATGTGG
GCAAAGCCAAATCGCTCAAAAGCCGCGTCAACAGCTACTTTGCCAAAACCATCGACCACCCCAAAACGCGGGCGCTGGTG
CAACGTATCGACAACATCGAAACCATCATAACCCGCTCTGAGACCGAAGCGCTGCTGCTTGAGCAAAACCTCATCAAGCT
GCATCGACCGCCCTACAATGTGCTACTGCGTGATGATAAATCCTATCTGTACGTGTTTATCTCAGCGGATAAACCTTATC
CAAGACTTGCCTATGGGCGCGGCAAAGGGCAACACCAAAAAGGCAGATTTTTTGGACCTTTTCCTTCGGCACATGCCGCC
AAACAGACCTTATTAATGATGCAAAAAATGTTCATGGTACGCCAATGCACCAATGCATTTTTTGCCCAGCGTCAGCGACC
TTGCCTAGAGTACCAAATCAAACGCTGTAAAGCGCCGTGTGTCGGGCTGGTATCGCCCGAAGAGTATGCCGATGACGTCA
ACAACACCATTCGATTTTTAAAAGGGGAAGGCACGGATTTGCAAGTCAAATTGGTGGGTAAAATGGAGCAGGCGGCTGAA
GACATGAACTTTGAGCAAGCCGCCTTGTATCGCGACCAACTCTCGATGCTACGCGAAGTACAAGCCAAACAAGCGGTATA
TACGGTCAAAGGTGAAGCCGATATCATCGCCATCGCCAGTCAAGCGGGCATTACCTGTGTGCATGTCATGAATGTGCGTA
ATGGGCAGGTTTTGGGTGGCAACAATTATTTTCCTGATGTGGATAGTGAAAACGACATAGCGGATAACTTGTCTGAGTTT
GTCAGCTCGTTTTATTTTCAAGTCAGTGATGATTTGCCCGAAGAGCTGATTATAAGCCATGAGTTGCCCGACCAAACCGC
GATGACAGAAGCCTTAACTGAAACCTTTGGCAAAAAGGTGACGATAAAAACCAAAGTTCGTGAGCAGCGGAGCGAATGGC
TCACCCTTGCCCAAATGAATGCCAACAACGCCCTGCAAACCAAATTGGGCGATTATTTGGAAGTTAAATCTCGCTTTAAC
GCGCTCAATGCGGTATTAAAAGAGGCGCTGCAAGGCAAATCGCTCGATCGTATCGAATGTTTTGATATCTCCCATACCAT
GGGTGAAGCCACCATCGCCAGCTGTGTGGTCGCTGACCAAGGCGGGCTACGCAAACGCGACTATCGCCAATATGCCATTC
ATGGCATCACGGGCGGTGACGACTATGCCGCCATGAAGCAAGTATTAAACCGCCGCTATAGCAAACAGCCGCTGCCAGAT
TTATTGCTGATTGATGGCGGTAAGGGGCAGCTTAATATGGCAAAAGATGTACTGAGCGAGCTGGGGATTTTAACCCAAAC
CTTGCTCGTCGGGGTGGCAAAAGGCGAAGGTCGCAAGGCTGGGCTTGAGGTACTGCATTTTATTGACCGTGAGCCACTCG
ATTTGCCGGCTGATAGCAAAGCACTGCATTTGATTATGCATATCCGTGATGAAGCGCACCGCTTTGCCATTACCGCACAC
CGCAAAAAACGCGATAAACGCCGCTCAAGCTCGGTGCTAGAAGCCATCCCTGGGTTGGGAGAAAAACGCCGCCGAGAGTT
GCTCAATCATTTTGGCGGCTTGCAGCAGCTGCTTGGCGCATCACAAGATGAAATTGGGCAAGTAAATGGCATTGGTAAGG
TAATGGCCAATACCATTTATAAAGTGTTGCATGGCTGA

Domains

Predicted by InterProScan.

UvrB/uvrC motif (UVR)

(232-259)

GIY-YIG catalytic domain (GIY-YIG)

(39-113)

Helix-hairpin-helix motif (HHH_2)

(576-621)

UvrC RNAse H endonuclease domain (UvrC_RNaseH_dom)

(413-557)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A378QBX2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  uvrC Streptococcus pneumoniae TIGR4

36.868

98.08

0.362
  uvrC Streptococcus pneumoniae R6

36.705

98.08

0.36
  uvrC Streptococcus pneumoniae D39

36.705

98.08

0.36