Detailed information NTG0451016

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: HRJ37_RS17535
• Genome accession: NZ_CP054136
• Coordinates: 3345828..3347003 (-)
• Length: 391 a.a.
• NCBI ID: WP_024719243.1
• Uniprot ID: A0A081LEM4
• Organism: Bacillus altitudinis strain 11-1-1
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3340828..3352003

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HRJ37_RS17505 (HRJ37_17505)	-	3341004..3341423 (-)	420	WP_017357864.1	TIGR03826 family flagellar region protein	-
HRJ37_RS17510 (HRJ37_17510)	-	3341480..3342202 (-)	723	WP_373870389.1	ComF family protein	-
HRJ37_RS17515 (HRJ37_17515)	-	3342163..3342456 (-)	294	WP_008348267.1	late competence development ComFB family protein	-
HRJ37_RS17520 (HRJ37_17520)	comFA	3342521..3343900 (-)	1380	WP_159160162.1	DEAD/DEAH box helicase	Machinery gene
HRJ37_RS17525 (HRJ37_17525)	-	3344020..3344862 (-)	843	WP_024719242.1	DegV family protein	-
HRJ37_RS17530 (HRJ37_17530)	degU	3345074..3345763 (-)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
HRJ37_RS17535 (HRJ37_17535)	degS	3345828..3347003 (-)	1176	WP_024719243.1	sensor histidine kinase	Regulator
HRJ37_RS17540 (HRJ37_17540)	-	3347225..3347893 (+)	669	WP_017357860.1	YigZ family protein	-
HRJ37_RS17545 (HRJ37_17545)	-	3347878..3348975 (+)	1098	WP_007499958.1	LCP family protein	-
HRJ37_RS17550 (HRJ37_17550)	-	3349014..3350081 (-)	1068	WP_024719245.1	glycosyltransferase family 4 protein	-
HRJ37_RS17555 (HRJ37_17555)	tuaH	3350216..3351412 (-)	1197	WP_041508115.1	teichuronic acid biosynthesis protein TuaH	-

Sequence

Protein

• Length: 391 a.a.
• Molecular weight: 45550.27 Da
• Isoelectric Point: 5.8757

>NTDB_id=451016 HRJ37_RS17535 WP_024719243.1 3345828..3347003(-) (degS) [Bacillus altitudinis strain 11-1-1]
MTTPKMDPKLLDSIIMKMLSTVDGSKDEVFRIGEQSRQQYESLVEELKQIKQQVNEVIDFGDKLEVHTRHARNRLSEVSR
NFNKFSEEEIREAYEKAHNLQVELTMIQQREKQLRERRDDLERRLLSLQDVIERSETLVSQITVVLNYLNQDLRQVGVLL
EDAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEEGFKEIRSLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLNTIEEYDGKTKITFQCLGDTENERIASQFEVALFRLAQEAVTNSLKHSEAEEISVKVEV
TKDFVTLIIKDDGKGFDMKDVKTNKNKSFGLLGMKERVDLLEGKMTIDSKIGLGTFIMIRVPLTLQNKIVK

Nucleotide

• Length: 1176 bp

>NTDB_id=451016 HRJ37_RS17535 WP_024719243.1 3345828..3347003(-) (degS) [Bacillus altitudinis strain 11-1-1]
ATGACAACACCTAAAATGGATCCGAAGTTATTGGATTCAATCATCATGAAAATGCTAAGTACAGTTGATGGCAGTAAGGA
CGAAGTATTTAGAATCGGCGAACAGTCCCGTCAACAATATGAAAGCCTAGTAGAAGAGCTCAAGCAAATTAAACAGCAAG
TCAACGAAGTAATTGATTTTGGGGATAAACTAGAAGTACATACGAGACATGCTAGAAATCGATTATCTGAGGTCAGCAGA
AACTTCAACAAATTCAGCGAAGAAGAAATACGAGAAGCCTATGAAAAAGCACATAACCTGCAAGTAGAATTGACCATGAT
CCAGCAGCGCGAAAAACAGCTGAGGGAAAGAAGAGATGATCTCGAAAGACGATTGTTAAGCTTACAAGATGTCATTGAAC
GTTCAGAAACGCTTGTGAGCCAGATCACGGTCGTTCTCAACTACTTGAACCAAGATTTACGTCAGGTCGGTGTTTTACTT
GAAGATGCTCAGGCAAAACAAGATTTTGGACTAAGAATTATTGAAGCCCAGGAAGAAGAGCGCAAAAGGGTATCACGAGA
AATCCATGATGGACCTGCTCAGATGCTGGCAAACGTGATGATGCGTTCAGAACTAATTGAACGAATTTTTAGAGACCGTG
GAACAGAAGAAGGCTTTAAAGAAATTAGAAGTCTAAGACAGAATGTGCGAAATGCACTGTACGAAGTGAGAAGAATCATT
TATGATTTAAGACCGATGGCTTTAGATGATTTGGGTCTCATTCCGACACTGCGAAAATACTTAAACACAATTGAAGAATA
TGATGGAAAAACCAAAATTACGTTCCAATGCCTAGGGGATACAGAAAATGAAAGAATTGCTTCTCAGTTCGAAGTGGCAC
TGTTTAGACTAGCCCAAGAAGCTGTCACAAATTCTTTAAAGCATTCTGAAGCTGAAGAAATCTCTGTGAAGGTTGAAGTG
ACGAAAGACTTTGTCACCTTAATTATCAAAGACGATGGAAAAGGCTTTGATATGAAGGATGTTAAAACAAATAAAAACAA
ATCCTTTGGGTTACTTGGTATGAAAGAGCGCGTAGACTTGCTAGAAGGTAAAATGACCATAGACTCAAAAATAGGTCTAG
GGACATTCATCATGATTAGAGTACCGTTAACATTACAAAATAAAATTGTAAAATAG

Domains

Predicted by InterproScan.

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Histidine kinase (HisKA_3) (180-248)

3D structure

• AlphaFold DB: A0A081LEM4

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	85.455	98.465	0.841