Detailed information NTG0450799

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: I6G42_RS01890
• Genome accession: NZ_CP065707
• Coordinates: 388653..389750 (+)
• Length: 365 a.a.
• NCBI ID: WP_038804774.1
• Uniprot ID: -
• Organism: Streptococcus oralis strain FDAARGOS_885
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 383653..394750

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I6G42_RS01865 (I6G42_01865)	pgsA	384175..384720 (-)	546	WP_000712147.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
I6G42_RS01870 (I6G42_01870)	rodZ	384731..385555 (-)	825	WP_038804770.1	cytoskeleton protein RodZ	-
I6G42_RS01875 (I6G42_01875)	yfmH	385591..386874 (-)	1284	WP_038804771.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
I6G42_RS01880 (I6G42_01880)	yfmF	386871..388121 (-)	1251	WP_038804772.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
I6G42_RS01885 (I6G42_01885)	yaaA	388282..388650 (+)	369	WP_038804773.1	S4 domain-containing protein YaaA	-
I6G42_RS01890 (I6G42_01890)	recF	388653..389750 (+)	1098	WP_038804774.1	DNA replication/repair protein RecF	Machinery gene
I6G42_RS01895 (I6G42_01895)	guaB	389803..391281 (-)	1479	WP_000073416.1	IMP dehydrogenase	-
I6G42_RS01900 (I6G42_01900)	trpS	391441..392469 (-)	1029	WP_038804775.1	tryptophan--tRNA ligase	-
I6G42_RS01905 (I6G42_01905)	-	392665..394287 (+)	1623	WP_000958774.1	ATP-binding cassette domain-containing protein	-

Sequence

Protein

• Length: 365 a.a.
• Molecular weight: 42039.21 Da
• Isoelectric Point: 7.7114

>NTDB_id=450799 I6G42_RS01890 WP_038804774.1 388653..389750(+) (recF) [Streptococcus oralis strain FDAARGOS_885]
MWLQHLTIKTFRNYKETKIDFNPKLNVFLGQNAQGKTNILEAIYFLALTRSHRTRTDKNLIHFDEEQLHLSGLLQKKTSS
IPLEIDLTPKGRVTKVNHLKQARLSDYIGHMNVVLFAPEDLQLIKGAPSVRRKFIDIELGQIKPIYLSDLSNYNHILKQR
NTYLKSSHKIDETFLSVLDDQLVEYGCRVIKHRIKFIKDLETFGQKKHLEISNQLEELSISYQSSVNFTDEELLMDSFKM
ALEKSRSRDLFKKNTGVGPHRDDISFYINGMDASFGSQGQHRSLVLSIKLAEIELMESITNESPILLLDDVMSELDNTRQ
LKLLETISHSIQTFITTTSLDHLQNLPENLSIFNIQNGKVSVNLN

Nucleotide

• Length: 1098 bp

>NTDB_id=450799 I6G42_RS01890 WP_038804774.1 388653..389750(+) (recF) [Streptococcus oralis strain FDAARGOS_885]
ATGTGGCTCCAACATTTAACAATAAAAACCTTTCGAAACTACAAAGAGACGAAAATTGATTTTAATCCAAAATTAAACGT
CTTTTTGGGTCAAAATGCGCAAGGAAAAACCAATATTCTAGAAGCAATCTATTTCTTGGCCTTAACACGCAGCCATCGTA
CTCGAACAGATAAAAATCTCATTCATTTTGATGAAGAACAACTCCATCTTTCTGGCTTGCTACAGAAAAAAACAAGCTCT
ATACCTCTAGAAATTGATTTAACACCAAAAGGGCGTGTGACTAAAGTCAATCACTTAAAACAAGCTCGCCTCTCAGACTA
CATTGGACATATGAATGTGGTCCTCTTTGCACCTGAAGATCTCCAGTTAATTAAGGGAGCACCTTCTGTCCGTCGAAAAT
TTATAGACATTGAACTGGGACAAATTAAACCAATCTACTTGTCAGACCTGTCAAACTACAACCATATACTCAAGCAGAGA
AATACCTACCTAAAATCTAGCCATAAGATTGATGAAACATTTCTGTCAGTCTTAGATGATCAGTTGGTAGAGTATGGTTG
TCGCGTTATAAAGCATCGGATAAAATTCATTAAAGACCTAGAGACATTTGGTCAAAAAAAACACTTAGAAATTTCAAATC
AATTAGAAGAACTGTCAATATCTTATCAATCATCTGTCAACTTTACTGATGAAGAACTGTTAATGGATTCTTTTAAAATG
GCTTTAGAAAAAAGTAGATCAAGAGACTTATTTAAAAAGAATACTGGTGTTGGCCCTCATCGAGATGATATTTCTTTTTA
TATCAATGGTATGGATGCTAGTTTTGGAAGTCAAGGTCAACATCGTAGTCTAGTACTTTCTATCAAACTAGCAGAGATTG
AGCTAATGGAAAGTATTACAAACGAGTCTCCGATACTACTGCTTGATGATGTTATGAGCGAACTTGACAATACACGGCAA
CTAAAATTACTAGAAACTATTTCTCACTCTATCCAAACATTTATCACAACAACAAGTTTAGACCACTTACAAAACTTGCC
TGAAAATCTTAGTATCTTCAATATCCAAAATGGTAAAGTATCTGTAAATCTAAATTGA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-359)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	89.589	100	0.896
recF	Bacillus subtilis subsp. subtilis str. 168	45.38	100	0.458