Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   I6G44_RS10715 Genome accession   NZ_CP065702
Coordinates   2124927..2125739 (-) Length   270 a.a.
NCBI ID   WP_003131583.1    Uniprot ID   Q9CIG7
Organism   Lactococcus lactis strain FDAARGOS_887     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2119927..2130739
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6G44_RS10690 (I6G44_10690) ytpR 2120153..2120779 (+) 627 WP_003131594.1 YtpR family tRNA-binding protein -
  I6G44_RS10695 (I6G44_10695) nox 2120942..2122282 (+) 1341 WP_021214845.1 H2O-forming NADH oxidase -
  I6G44_RS10700 (I6G44_10700) - 2122372..2122761 (+) 390 WP_010905314.1 single-stranded DNA-binding protein -
  I6G44_RS10705 (I6G44_10705) groES 2122881..2123165 (+) 285 WP_197932640.1 co-chaperone GroES -
  I6G44_RS10710 (I6G44_10710) groL 2123253..2124881 (+) 1629 WP_197932574.1 chaperonin GroEL -
  I6G44_RS10715 (I6G44_10715) vicX 2124927..2125739 (-) 813 WP_003131583.1 MBL fold metallo-hydrolase Regulator
  I6G44_RS10720 (I6G44_10720) vicK 2125910..2127352 (-) 1443 WP_197932575.1 sensor histidine kinase Regulator
  I6G44_RS10725 (I6G44_10725) yycF 2127345..2128046 (-) 702 WP_003131580.1 response regulator YycF -
  I6G44_RS10730 (I6G44_10730) tmk 2128224..2128859 (+) 636 WP_003131575.1 dTMP kinase -
  I6G44_RS10735 (I6G44_10735) - 2128992..2129852 (+) 861 WP_003131573.1 DNA polymerase III subunit delta' -
  I6G44_RS10740 (I6G44_10740) yaaT 2129904..2130686 (+) 783 WP_010905316.1 stage 0 sporulation family protein Regulator

Sequence

Protein


Download         Length: 270 a.a.        Molecular weight: 30522.37 Da        Isoelectric Point: 5.8494

>NTDB_id=450646 I6G44_RS10715 WP_003131583.1 2124927..2125739(-) (vicX) [Lactococcus lactis strain FDAARGOS_887]
MTEQNGFKYSILASGSTGNSFYLETPKKKILVDAGLSGKKIESLLSEIDRDIHDIDALLITHEHSDHIKGIGVLARKYGI
DLYANEDTWSELDSKNALGKIPVEQKHLFEMGKTMTFGDIDIESFGVSHDAIAPQFYRFMKDNKSFVMLTDTGYVSDRMR
GTIENADAYLMESNHDIEILRMGAYPWRTKQRILSDQGHLSNEDGAEAAFSIHGNKTKRIFLGHLSLNNNIKELAHLTMD
GYLQQHDVDTKKDLKILDTSHEHASQLYDI

Nucleotide


Download         Length: 813 bp        

>NTDB_id=450646 I6G44_RS10715 WP_003131583.1 2124927..2125739(-) (vicX) [Lactococcus lactis strain FDAARGOS_887]
ATGACTGAACAAAATGGCTTTAAATATTCCATTTTAGCCTCTGGTTCAACAGGAAATTCTTTTTACTTAGAAACTCCAAA
GAAAAAAATTCTTGTTGATGCCGGACTATCTGGAAAAAAAATAGAAAGTTTACTATCAGAAATTGACCGTGACATTCATG
ATATTGATGCTTTATTAATTACCCATGAACATAGTGACCATATCAAAGGGATTGGTGTTTTGGCAAGAAAATATGGTATT
GACCTTTACGCAAATGAAGATACTTGGTCTGAACTAGATAGTAAAAATGCTTTAGGAAAAATCCCTGTTGAACAAAAACA
TCTGTTTGAAATGGGAAAAACAATGACTTTTGGTGATATTGATATTGAATCTTTCGGCGTGAGTCACGATGCTATCGCAC
CACAGTTTTATCGTTTCATGAAAGATAACAAAAGTTTTGTTATGCTAACTGATACAGGTTATGTATCCGATAGAATGCGT
GGCACCATTGAAAATGCAGATGCTTATCTTATGGAATCAAACCATGACATTGAGATACTCCGCATGGGAGCTTATCCTTG
GCGGACAAAGCAACGTATCCTAAGTGACCAAGGCCACTTATCTAATGAGGACGGCGCTGAGGCTGCTTTTAGTATTCATG
GTAATAAGACAAAACGAATTTTTCTAGGGCACTTGAGTTTAAATAATAATATCAAAGAACTTGCTCATCTTACTATGGAT
GGTTACTTACAGCAACATGATGTCGATACCAAAAAGGACTTGAAGATCCTTGATACTAGTCACGAACATGCTAGTCAACT
TTACGATATTTAG

Domains

Predicted by InterProScan.

Beta-lactamase superfamily domain (Lactamase_B_2)

(29-222)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q9CIG7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

68.519

100

0.685