Detailed information NTG0450606

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: I6G44_RS06630
• Genome accession: NZ_CP065702
• Coordinates: 1331113..1332189 (+)
• Length: 358 a.a.
• NCBI ID: WP_010906242.1
• Uniprot ID: Q9CE70
• Organism: Lactococcus lactis strain FDAARGOS_887
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1326113..1337189

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I6G44_RS06605 (I6G44_06605)	pgsA	1326273..1326845 (-)	573	WP_010906238.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
I6G44_RS06610 (I6G44_06610)	-	1326886..1327782 (-)	897	WP_010906239.1	helix-turn-helix domain-containing protein	-
I6G44_RS06615 (I6G44_06615)	yfmH	1327994..1329277 (-)	1284	WP_197932528.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
I6G44_RS06620 (I6G44_06620)	yfmF	1329267..1330553 (-)	1287	WP_021214872.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
I6G44_RS06625 (I6G44_06625)	yaaA	1330751..1331113 (+)	363	WP_004254746.1	S4 domain-containing protein YaaA	-
I6G44_RS06630 (I6G44_06630)	recF	1331113..1332189 (+)	1077	WP_010906242.1	DNA replication/repair protein RecF	Machinery gene
I6G44_RS06635 (I6G44_06635)	-	1332276..1332644 (-)	369	WP_004254740.1	carboxymuconolactone decarboxylase family protein	-
I6G44_RS06640 (I6G44_06640)	-	1332722..1333099 (+)	378	WP_010906243.1	MerR family transcriptional regulator	-
I6G44_RS06645 (I6G44_06645)	-	1333112..1334056 (-)	945	WP_010906244.1	alpha/beta hydrolase	-
I6G44_RS06650 (I6G44_06650)	galE	1334179..1335159 (-)	981	WP_010906245.1	UDP-glucose 4-epimerase GalE	-

Sequence

Protein

• Length: 358 a.a.
• Molecular weight: 41356.23 Da
• Isoelectric Point: 6.8652

>NTDB_id=450606 I6G44_RS06630 WP_010906242.1 1331113..1332189(+) (recF) [Lactococcus lactis strain FDAARGOS_887]
MKLKAIELKNFRNYEELKLDFHPNLNIFLGQNAQGKTNILEAIHFLALTRSHRTSHDKELISWSQQEMKVSGVVEKAHAT
VPLEVQLSPKGRIAKANHLKENRLADYIGQLKILMFAPENLELVKGSPATRRKFMDIELGQIHAVYLYDSMRYNRALKER
NAYLKFDKDKIDKNFLSVLDGQLAEHGNKIMLERQNFIDKLEVHAKKIHEQLTHGKENLKIIYNQNVKTDFSKELLSRQD
HDIFRHQTSVGPHRDDLQFFINEINVADFGSQGQQRTVALSIKLAEIDLIFEETGEYPILLLDDVMSELDNHRQLDLIET
SLGKTQTFITTTTLDHLKNLPENLSIFHVNAGTIEQEQ

Nucleotide

• Length: 1077 bp

>NTDB_id=450606 I6G44_RS06630 WP_010906242.1 1331113..1332189(+) (recF) [Lactococcus lactis strain FDAARGOS_887]
ATGAAACTCAAAGCAATTGAACTCAAAAATTTTCGTAATTATGAGGAATTAAAACTTGATTTTCACCCTAATCTCAATAT
TTTTTTAGGACAAAATGCTCAAGGGAAAACAAATATTCTTGAGGCGATTCATTTTTTAGCACTCACTCGTAGTCACAGAA
CAAGTCACGACAAAGAGCTCATTTCTTGGTCACAACAAGAAATGAAGGTCTCAGGAGTCGTTGAAAAAGCTCATGCAACT
GTTCCACTTGAAGTTCAATTAAGTCCCAAAGGGAGAATTGCTAAAGCCAATCATCTCAAAGAAAATCGCTTAGCCGACTA
CATTGGTCAACTAAAAATCTTGATGTTTGCACCTGAAAATTTGGAATTAGTCAAAGGTTCTCCAGCTACCCGCAGAAAAT
TTATGGATATTGAACTGGGACAAATCCATGCGGTTTACCTTTATGATTCCATGCGATATAATCGTGCGTTAAAAGAACGG
AATGCTTACTTAAAATTTGATAAAGACAAAATTGATAAAAATTTTTTAAGTGTTCTTGACGGACAATTAGCTGAACATGG
TAATAAAATCATGCTTGAGCGGCAAAATTTTATTGATAAACTTGAAGTTCATGCAAAAAAAATCCATGAGCAACTTACTC
ATGGTAAAGAAAATTTAAAAATCATTTATAATCAAAATGTGAAAACTGACTTTTCAAAAGAATTATTGAGCAGACAAGAC
CATGATATTTTTAGGCATCAAACATCGGTTGGCCCTCATCGTGACGATTTACAATTTTTTATCAATGAGATTAATGTTGC
TGATTTTGGTAGTCAAGGACAACAACGAACCGTTGCTCTCTCAATTAAATTAGCAGAAATTGATTTAATTTTTGAAGAGA
CTGGTGAGTATCCGATTTTACTTTTAGATGATGTCATGAGTGAATTAGACAATCATCGTCAACTTGATTTGATTGAAACA
AGTTTGGGTAAAACACAAACTTTTATAACTACAACTACTCTTGATCATCTTAAAAATTTACCTGAAAATCTGAGTATTTT
CCATGTTAATGCTGGAACCATTGAACAAGAGCAATAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-353)

3D structure

• AlphaFold DB: Q9CE70

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	55	100	0.553
recF	Bacillus subtilis subsp. subtilis str. 168	45.977	97.207	0.447