Detailed information NTG0450442

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: I6G80_RS14330
• Genome accession: NZ_CP065647
• Coordinates: 2667736..2668842 (+)
• Length: 368 a.a.
• NCBI ID: WP_197941949.1
• Uniprot ID: -
• Organism: Bacillus licheniformis strain FDAARGOS_923
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 2662736..2673842

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I6G80_RS14300 (I6G80_14300)	-	2663589..2664023 (+)	435	WP_195536313.1	SMI1/KNR4 family protein	-
I6G80_RS14305 (I6G80_14305)	-	2664078..2664542 (+)	465	WP_195536314.1	SMI1/KNR4 family protein	-
I6G80_RS14310 (I6G80_14310)	-	2664633..2665208 (+)	576	WP_146874079.1	SMI1/KNR4 family protein	-
I6G80_RS14315 (I6G80_14315)	rok	2665318..2665800 (+)	483	WP_197941945.1	hypothetical protein	Regulator
I6G80_RS14320 (I6G80_14320)	-	2665871..2666224 (+)	354	WP_026579425.1	hypothetical protein	-
I6G80_RS14325 (I6G80_14325)	-	2666365..2667624 (+)	1260	WP_197941947.1	MFS transporter	-
I6G80_RS14330 (I6G80_14330)	rapC	2667736..2668842 (+)	1107	WP_197941949.1	hypothetical protein	Regulator
I6G80_RS25060	-	2668839..2668967 (+)	129	WP_021837855.1	hypothetical protein	-
I6G80_RS24815	-	2669402..2669485 (-)	84	WP_073411138.1	putative holin-like toxin	-
I6G80_RS14335 (I6G80_14335)	-	2669687..2669986 (-)	300	WP_034291560.1	hypothetical protein	-
I6G80_RS14340 (I6G80_14340)	-	2670005..2670259 (-)	255	WP_009328416.1	phage holin	-
I6G80_RS14345 (I6G80_14345)	-	2670278..2670664 (-)	387	WP_021837858.1	hypothetical protein	-
I6G80_RS14350 (I6G80_14350)	-	2670796..2671884 (-)	1089	WP_197941951.1	N-acetylmuramoyl-L-alanine amidase	-

Sequence

Protein

• Length: 368 a.a.
• Molecular weight: 43775.92 Da
• Isoelectric Point: 5.0801

>NTDB_id=450442 I6G80_RS14330 WP_197941949.1 2667736..2668842(+) (rapC) [Bacillus licheniformis strain FDAARGOS_923]
MTTTEIAYEEVANKINQWYTMIKKREIEDAIKLKEEIDCLLDDMEENQNLLLYYNLLDARHKMSVDMFKSSGEILEKIQK
SPEMQKTDDMLQYYFLFFSGQYMFFKKKYIDAINYYKLAEDKLIKIEDEIEKAEFYYHLAISYYHIDQYFFSLAYAEKAL
TIFREFEDYAHRSISSEMILGANKLDLFRYESAYEHYSHALKFAKAKQIPESEGKAYHNLGIFYIRRNMLSEAKDCFKNA
LQLQDYIQSINGLKSIYNLTHVLYKSGHIEEAREWYDKGLKRAEKEGDKEYLAKLTLVNTLYDEYNESVLTNSLDILEKL
DLWNDVAELTLEVGCYYKKSDDIKNAAKYLEKCIHARDQILKVTEELK

Nucleotide

• Length: 1107 bp

>NTDB_id=450442 I6G80_RS14330 WP_197941949.1 2667736..2668842(+) (rapC) [Bacillus licheniformis strain FDAARGOS_923]
TTGACAACGACTGAAATTGCATATGAAGAAGTAGCCAATAAGATTAACCAGTGGTATACGATGATTAAAAAGCGTGAAAT
TGAAGATGCCATAAAGTTGAAAGAGGAAATTGATTGCTTGTTGGATGATATGGAGGAGAATCAAAATTTGCTCCTTTATT
ACAATCTCTTAGATGCGCGTCACAAGATGTCGGTAGACATGTTTAAGTCGTCAGGGGAAATCCTTGAGAAGATTCAGAAA
AGTCCCGAAATGCAGAAAACGGATGATATGCTCCAATATTATTTTTTGTTTTTCTCTGGTCAATATATGTTTTTCAAAAA
GAAGTACATAGATGCAATTAATTATTACAAATTAGCTGAAGATAAGCTGATTAAAATTGAAGATGAAATTGAAAAAGCGG
AATTTTATTATCATTTAGCCATATCATATTATCACATTGATCAATATTTCTTCTCATTAGCTTATGCTGAAAAAGCTCTA
ACTATCTTCAGGGAATTTGAAGACTATGCACATAGATCAATTAGCAGTGAAATGATCTTGGGTGCAAATAAACTTGATTT
ATTCCGTTATGAGTCAGCTTATGAGCATTACAGCCATGCCTTAAAATTTGCAAAGGCTAAGCAGATTCCTGAGTCTGAAG
GAAAGGCATATCATAATCTTGGGATATTCTATATAAGAAGAAACATGCTATCCGAAGCAAAAGACTGTTTTAAAAATGCT
TTGCAGCTTCAAGATTATATCCAAAGCATAAATGGACTTAAATCAATCTATAACCTTACTCATGTCTTGTATAAATCGGG
ACATATTGAAGAAGCAAGGGAATGGTATGACAAAGGATTGAAACGTGCAGAAAAAGAAGGAGATAAGGAATATTTGGCGA
AACTTACACTTGTTAACACCTTATACGATGAGTACAATGAAAGTGTGTTAACGAATTCCCTTGACATTTTAGAAAAGTTG
GATTTATGGAATGATGTAGCAGAATTGACACTAGAAGTGGGGTGCTACTACAAAAAATCCGATGATATCAAGAATGCAGC
AAAATATCTTGAAAAATGTATTCACGCAAGGGATCAAATTCTAAAAGTGACGGAGGAATTAAAATGA

Domains

Predicted by InterProScan.

• MalT-like TPR region (TPR_MalT) (153-286)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-63)

• Tetratricopeptide repeat (TPR_8) (333-354)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	35.467	100	0.361