Detailed information
Bioinformatically predicted
Overview
| Name | rcrR | Type | Regulator |
| Locus tag | FOC63_RS10750 | Genome accession | NZ_CP054015 |
| Coordinates | 2148188..2148628 (-) | Length | 146 a.a. |
| NCBI ID | WP_012962070.1 | Uniprot ID | A0A139MWJ9 |
| Organism | Streptococcus gallolyticus strain FDAARGOS_755 | ||
| Function | regulate competence (predicted from homology) Competence regulation |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 2140599..2164890 | 2148188..2148628 | within | 0 |
Gene organization within MGE regions
Location: 2140599..2164890
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FOC63_RS10715 (FOC63_10715) | - | 2140599..2141372 (-) | 774 | WP_009854387.1 | ABC transporter ATP-binding protein | - |
| FOC63_RS10720 (FOC63_10720) | - | 2141385..2142305 (-) | 921 | WP_009854388.1 | glycine betaine ABC transporter substrate-binding protein | - |
| FOC63_RS10725 (FOC63_10725) | - | 2142295..2142930 (-) | 636 | WP_009854389.1 | ABC transporter permease | - |
| FOC63_RS10730 (FOC63_10730) | - | 2142920..2143372 (-) | 453 | WP_009854390.1 | MarR family winged helix-turn-helix transcriptional regulator | - |
| FOC63_RS10735 (FOC63_10735) | - | 2143362..2144339 (-) | 978 | WP_009854391.1 | zinc-binding dehydrogenase | - |
| FOC63_RS10740 (FOC63_10740) | rcrQ | 2144608..2146380 (-) | 1773 | WP_009854392.1 | ABC transporter ATP-binding protein | Regulator |
| FOC63_RS10745 (FOC63_10745) | rcrP | 2146370..2148184 (-) | 1815 | WP_009854393.1 | ABC transporter ATP-binding protein | Regulator |
| FOC63_RS10750 (FOC63_10750) | rcrR | 2148188..2148628 (-) | 441 | WP_012962070.1 | MarR family winged helix-turn-helix transcriptional regulator | Regulator |
| FOC63_RS10755 (FOC63_10755) | - | 2148803..2149213 (-) | 411 | WP_009854395.1 | peptide deformylase | - |
| FOC63_RS10760 (FOC63_10760) | - | 2149210..2149719 (-) | 510 | WP_009854396.1 | GNAT family N-acetyltransferase | - |
| FOC63_RS10765 (FOC63_10765) | gdhA | 2149986..2151335 (-) | 1350 | WP_009854398.1 | NADP-specific glutamate dehydrogenase | - |
| FOC63_RS10770 (FOC63_10770) | - | 2151582..2152079 (+) | 498 | WP_009854399.1 | DUF308 domain-containing protein | - |
| FOC63_RS10775 (FOC63_10775) | queF | 2152136..2152627 (-) | 492 | WP_009854400.1 | preQ(1) synthase | - |
| FOC63_RS10780 (FOC63_10780) | queE | 2152640..2153353 (-) | 714 | WP_009854401.1 | 7-carboxy-7-deazaguanine synthase QueE | - |
| FOC63_RS10785 (FOC63_10785) | queD | 2153346..2153792 (-) | 447 | WP_009854402.1 | 6-carboxytetrahydropterin synthase QueD | - |
| FOC63_RS10790 (FOC63_10790) | queC | 2153798..2154445 (-) | 648 | WP_043878574.1 | 7-cyano-7-deazaguanine synthase QueC | - |
| FOC63_RS10795 (FOC63_10795) | - | 2154686..2156455 (-) | 1770 | WP_009854404.1 | ABC transporter ATP-binding protein | - |
| FOC63_RS10800 (FOC63_10800) | - | 2156458..2158197 (-) | 1740 | WP_043878575.1 | ABC transporter ATP-binding protein | - |
| FOC63_RS10805 (FOC63_10805) | - | 2158275..2160146 (-) | 1872 | WP_009854406.1 | ABC-F family ATP-binding cassette domain-containing protein | - |
| FOC63_RS10810 (FOC63_10810) | - | 2160143..2161348 (-) | 1206 | WP_009854407.1 | CCA tRNA nucleotidyltransferase | - |
| FOC63_RS10815 (FOC63_10815) | dapB | 2161345..2162112 (-) | 768 | WP_009854408.1 | 4-hydroxy-tetrahydrodipicolinate reductase | - |
| FOC63_RS10820 (FOC63_10820) | - | 2162132..2162980 (-) | 849 | WP_009854409.1 | DegV family protein | - |
| FOC63_RS10825 (FOC63_10825) | - | 2162980..2163360 (-) | 381 | WP_009854410.1 | DUF1149 family protein | - |
| FOC63_RS10830 (FOC63_10830) | - | 2163489..2164262 (-) | 774 | WP_009854411.1 | TMEM175 family protein | - |
Sequence
Protein
Download Length: 146 a.a. Molecular weight: 17156.66 Da Isoelectric Point: 9.3565
>NTDB_id=450177 FOC63_RS10750 WP_012962070.1 2148188..2148628(-) (rcrR) [Streptococcus gallolyticus strain FDAARGOS_755]
MHKKDPFSQFRDFINLMENRVHALAESHGVENLAGPQGFAVMYLRDNPDKEIYIKDIEKRLRISKSVTSNLIKRMEKNGF
IQVVSSKEDKRYKQVVLTELGKSKAQDIQDFHDEMHRQILAGVDHEDLKISFRVFDRILKNLENKE
MHKKDPFSQFRDFINLMENRVHALAESHGVENLAGPQGFAVMYLRDNPDKEIYIKDIEKRLRISKSVTSNLIKRMEKNGF
IQVVSSKEDKRYKQVVLTELGKSKAQDIQDFHDEMHRQILAGVDHEDLKISFRVFDRILKNLENKE
Nucleotide
Download Length: 441 bp
>NTDB_id=450177 FOC63_RS10750 WP_012962070.1 2148188..2148628(-) (rcrR) [Streptococcus gallolyticus strain FDAARGOS_755]
ATGCACAAGAAAGATCCGTTTTCACAGTTTAGGGATTTTATCAATTTAATGGAAAATCGTGTCCACGCTCTTGCGGAAAG
TCATGGTGTTGAAAATCTAGCTGGTCCACAGGGATTTGCAGTGATGTATCTTCGTGATAATCCCGATAAAGAAATTTATA
TTAAGGACATTGAGAAGAGACTAAGAATTTCAAAGTCAGTGACTAGTAATTTGATTAAGCGCATGGAGAAAAATGGTTTT
ATCCAAGTTGTTTCGTCAAAAGAAGATAAGCGTTATAAGCAAGTTGTGTTGACTGAGCTTGGAAAATCAAAGGCTCAGGA
TATTCAAGATTTCCATGATGAAATGCATAGGCAAATCTTAGCTGGTGTTGACCATGAGGATCTCAAAATCTCGTTTCGCG
TCTTTGACCGCATTTTGAAAAATTTAGAAAACAAGGAGTAA
ATGCACAAGAAAGATCCGTTTTCACAGTTTAGGGATTTTATCAATTTAATGGAAAATCGTGTCCACGCTCTTGCGGAAAG
TCATGGTGTTGAAAATCTAGCTGGTCCACAGGGATTTGCAGTGATGTATCTTCGTGATAATCCCGATAAAGAAATTTATA
TTAAGGACATTGAGAAGAGACTAAGAATTTCAAAGTCAGTGACTAGTAATTTGATTAAGCGCATGGAGAAAAATGGTTTT
ATCCAAGTTGTTTCGTCAAAAGAAGATAAGCGTTATAAGCAAGTTGTGTTGACTGAGCTTGGAAAATCAAAGGCTCAGGA
TATTCAAGATTTCCATGATGAAATGCATAGGCAAATCTTAGCTGGTGTTGACCATGAGGATCTCAAAATCTCGTTTCGCG
TCTTTGACCGCATTTTGAAAAATTTAGAAAACAAGGAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| rcrR | Streptococcus mutans UA159 |
56.643 |
97.945 |
0.555 |