Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   FOC63_RS03910 Genome accession   NZ_CP054015
Coordinates   801062..801838 (+) Length   258 a.a.
NCBI ID   WP_009855222.1    Uniprot ID   A0AA36K0A4
Organism   Streptococcus gallolyticus strain FDAARGOS_755     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 796062..806838
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FOC63_RS03900 (FOC63_03900) rlmH 799037..799516 (-) 480 WP_009855220.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  FOC63_RS03905 (FOC63_03905) htrA 799727..800992 (+) 1266 WP_013643604.1 S1C family serine protease Regulator
  FOC63_RS03910 (FOC63_03910) spo0J 801062..801838 (+) 777 WP_009855222.1 ParB/RepB/Spo0J family partition protein Regulator
  FOC63_RS03915 (FOC63_03915) dnaA 802042..803397 (+) 1356 WP_009855223.1 chromosomal replication initiator protein DnaA -
  FOC63_RS03920 (FOC63_03920) dnaN 803555..804691 (+) 1137 WP_009855224.1 DNA polymerase III subunit beta -
  FOC63_RS03925 (FOC63_03925) - 804822..805706 (+) 885 WP_009855225.1 diacylglycerol/lipid kinase family protein -
  FOC63_RS03930 (FOC63_03930) - 805718..805912 (+) 195 WP_009855226.1 DUF951 domain-containing protein -

Sequence

Protein


Download         Length: 258 a.a.        Molecular weight: 29712.54 Da        Isoelectric Point: 9.7762

>NTDB_id=450137 FOC63_RS03910 WP_009855222.1 801062..801838(+) (spo0J) [Streptococcus gallolyticus strain FDAARGOS_755]
MPETLILIKIENISPNPYQPRLEFKQEELEELARSIKTNGLIQPIIVRESTVFGYELIAGERRLRASKMAGLTEIPAIIK
NISNQESMQLAIVENLQRSDLNPIEEAKAYQQLLEKNQMTHEELAQFMGKSRPYITNCLRLLNLPKSLSDAVEKGELSQG
HARVLLTLKNAEEQEKWYQKILTEDISVRKLEHLLKPAKKKKNRPKKKDIFIRNQEEELTKQLGLPVKIIVSKTGTKGEV
SLHFQSEEDLNRIINKLK

Nucleotide


Download         Length: 777 bp        

>NTDB_id=450137 FOC63_RS03910 WP_009855222.1 801062..801838(+) (spo0J) [Streptococcus gallolyticus strain FDAARGOS_755]
ATGCCTGAAACACTCATATTAATCAAAATTGAAAATATCTCACCTAATCCCTACCAACCCCGTTTAGAATTTAAACAAGA
AGAGCTAGAAGAACTAGCACGTTCGATTAAAACTAATGGGCTTATTCAGCCGATTATCGTCCGAGAATCAACTGTCTTTG
GTTATGAGCTTATTGCCGGTGAAAGACGTCTAAGAGCCTCAAAAATGGCAGGTTTAACCGAAATTCCTGCTATCATAAAA
AATATCTCCAATCAGGAGAGCATGCAGCTGGCTATCGTTGAAAATTTGCAACGTTCTGATTTAAATCCAATCGAAGAAGC
AAAAGCTTACCAGCAACTTCTGGAAAAAAATCAAATGACCCATGAAGAATTAGCACAATTTATGGGAAAATCTCGCCCCT
ACATTACCAATTGCCTCAGATTACTTAACCTTCCTAAAAGTCTCTCTGATGCCGTTGAAAAAGGTGAGCTGTCTCAAGGA
CACGCGCGTGTTCTTTTAACCCTTAAAAATGCTGAAGAACAAGAAAAGTGGTATCAAAAAATTCTGACAGAGGATATTAG
CGTTAGAAAACTTGAACATTTACTAAAACCTGCTAAAAAGAAAAAAAATCGTCCCAAAAAGAAAGATATTTTCATTCGAA
ATCAAGAAGAAGAATTGACCAAACAGTTAGGACTTCCTGTTAAAATTATCGTCTCTAAAACTGGCACAAAAGGAGAGGTG
AGTTTACATTTTCAATCTGAAGAAGACTTAAACAGAATTATCAACAAGCTAAAATAG

Domains

Predicted by InterproScan.

HTH domain found in ParB protein (HTH_ParB)

(149-196)

ParB/Sulfiredoxin domain (ParB_N)

(8-95)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

59.533

99.612

0.593