Detailed information NTG0450068

Bioinformatically predicted

Overview

• Name: comGA
• Type: Machinery gene
• Locus tag: FOC68_RS03975
• Genome accession: NZ_CP054006
• Coordinates: 783535..784509 (-)
• Length: 324 a.a.
• NCBI ID: WP_002449861.1
• Uniprot ID: -
• Organism: Staphylococcus hominis strain FDAARGOS_762
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 778535..789509

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FOC68_RS03945 (FOC68_03945)	gcvT	779099..780190 (-)	1092	WP_002449834.1	glycine cleavage system aminomethyltransferase GcvT	-
FOC68_RS03950 (FOC68_03950)	-	780382..780891 (-)	510	WP_002449809.1	shikimate kinase	-
FOC68_RS03955 (FOC68_03955)	-	781056..781553 (-)	498	WP_002449908.1	competence protein ComG	-
FOC68_RS03960 (FOC68_03960)	comGD	781745..782179 (-)	435	WP_002449773.1	competence type IV pilus minor pilin ComGD	-
FOC68_RS03965 (FOC68_03965)	comGC	782169..782480 (-)	312	WP_002449700.1	competence type IV pilus major pilin ComGC	Machinery gene
FOC68_RS03970 (FOC68_03970)	comGB	782499..783563 (-)	1065	WP_002455292.1	competence type IV pilus assembly protein ComGB	-
FOC68_RS03975 (FOC68_03975)	comGA	783535..784509 (-)	975	WP_002449861.1	competence type IV pilus ATPase ComGA	Machinery gene
FOC68_RS03980 (FOC68_03980)	-	784560..785186 (-)	627	WP_002449717.1	MBL fold metallo-hydrolase	-
FOC68_RS03985 (FOC68_03985)	-	785188..785511 (-)	324	WP_002449910.1	MTH1187 family thiamine-binding protein	-
FOC68_RS03990 (FOC68_03990)	-	785511..786497 (-)	987	WP_002449785.1	ROK family glucokinase	-
FOC68_RS03995 (FOC68_03995)	-	786494..786697 (-)	204	WP_037555982.1	YqgQ family protein	-
FOC68_RS04000 (FOC68_04000)	-	786681..788138 (-)	1458	WP_002449916.1	rhomboid family protein	-
FOC68_RS04005 (FOC68_04005)	-	788138..788689 (-)	552	WP_002449726.1	5-formyltetrahydrofolate cyclo-ligase	-
FOC68_RS04010 (FOC68_04010)	rpmG	788898..789047 (-)	150	WP_002449881.1	50S ribosomal protein L33	-

Sequence

Protein

• Length: 324 a.a.
• Molecular weight: 36955.92 Da
• Isoelectric Point: 8.2269

>NTDB_id=450068 FOC68_RS03975 WP_002449861.1 783535..784509(-) (comGA) [Staphylococcus hominis strain FDAARGOS_762]
MKLLFQEIINKAISKNASDVHFIPSEDKVHIKFRVNDRLETYEIFSNDIYEKLLIYMKFKANLDVSTHQVAQSGRYTYHA
KSIFYLRISTLPLSLGIESCVIRLIPQYFTSKREYKDFNDFKPLMNKKQGLILLTGPTGSGKSTLMYQLVLYAFQELNLN
VITIENPVEQLLKGITQVSVNHKAGIDYVNSFKAILRCDPDVILIGEIRDAEVAKCVIQASLSGHLVLTTMHSSNCKGAI
LRLLEMGISVQEISQAINVISNQRLVTTTLNQRKLVCESITNNQIQYFFEHNHTLPETFNNLKEKLLSLSKEGLICEDVV
EKYI

Nucleotide

• Length: 975 bp

>NTDB_id=450068 FOC68_RS03975 WP_002449861.1 783535..784509(-) (comGA) [Staphylococcus hominis strain FDAARGOS_762]
TTGAAATTATTATTTCAAGAAATAATTAATAAAGCAATTTCAAAAAATGCAAGTGACGTACACTTTATTCCTTCAGAGGA
TAAAGTACATATTAAATTCAGAGTGAATGATAGGTTAGAGACGTATGAAATATTTAGTAATGACATTTATGAAAAATTAT
TAATTTATATGAAATTTAAAGCAAATTTAGATGTATCAACACATCAAGTAGCTCAAAGTGGTAGATATACTTATCATGCT
AAATCAATATTTTATTTAAGAATTTCTACTTTACCTTTGTCATTAGGAATAGAAAGTTGTGTTATCAGACTTATCCCTCA
ATATTTCACTTCTAAAAGAGAGTATAAAGACTTTAATGACTTTAAACCTCTAATGAATAAAAAGCAAGGTCTCATTTTAC
TTACTGGTCCAACAGGTTCAGGTAAAAGTACTTTGATGTATCAATTAGTACTCTATGCTTTTCAAGAATTAAATTTAAAT
GTTATTACAATAGAAAATCCTGTTGAACAATTATTAAAAGGCATAACACAAGTGTCAGTAAATCATAAAGCTGGTATAGA
TTATGTTAATTCATTTAAAGCAATATTAAGATGTGATCCAGATGTTATTTTAATTGGTGAAATTAGAGATGCTGAAGTGG
CAAAATGTGTTATTCAAGCAAGTTTAAGTGGTCATTTAGTACTAACCACTATGCATTCAAGCAATTGTAAGGGCGCAATA
CTCAGATTGTTAGAGATGGGGATTAGTGTTCAAGAAATTTCACAAGCAATAAATGTCATTTCAAATCAAAGATTAGTTAC
AACTACTTTAAATCAAAGAAAGCTTGTTTGTGAGTCTATTACAAATAATCAAATTCAATATTTTTTTGAACATAACCATA
CGCTTCCTGAGACATTTAATAATTTAAAAGAAAAATTGTTATCGCTATCGAAAGAAGGTCTTATATGTGAAGATGTGGTT
GAAAAATATATTTAA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (7-267)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGA	Staphylococcus aureus MW2	69.753	100	0.698
comGA	Staphylococcus aureus N315	69.753	100	0.698