Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   I5367_RS08285 Genome accession   NZ_CP065539
Coordinates   1634130..1635398 (+) Length   422 a.a.
NCBI ID   WP_015417482.1    Uniprot ID   A7Z4S7
Organism   Bacillus amyloliquefaciens strain DGL1     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1629130..1640398
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I5367_RS08260 (I5367_08260) pyrH 1629925..1630647 (+) 723 WP_003154213.1 UMP kinase -
  I5367_RS08265 (I5367_08265) frr 1630650..1631207 (+) 558 WP_003154212.1 ribosome recycling factor -
  I5367_RS08270 (I5367_08270) - 1631333..1632115 (+) 783 WP_007409795.1 isoprenyl transferase -
  I5367_RS08275 (I5367_08275) - 1632119..1632916 (+) 798 WP_007409796.1 phosphatidate cytidylyltransferase -
  I5367_RS08280 (I5367_08280) dxr 1632972..1634123 (+) 1152 WP_012117564.1 1-deoxy-D-xylulose-5-phosphate reductoisomerase -
  I5367_RS08285 (I5367_08285) eeP 1634130..1635398 (+) 1269 WP_015417482.1 RIP metalloprotease RseP Regulator
  I5367_RS08290 (I5367_08290) proS 1635430..1637124 (+) 1695 WP_007611460.1 proline--tRNA ligase -

Sequence

Protein


Download         Length: 422 a.a.        Molecular weight: 46515.44 Da        Isoelectric Point: 6.1739

>NTDB_id=449990 I5367_RS08285 WP_015417482.1 1634130..1635398(+) (eeP) [Bacillus amyloliquefaciens strain DGL1]
MFVNTVIAFIIIFGTLVFFHELGHLLLAQRAGILCREFAIGFGPKIFSFKKNETVYTIRLLPVGGFVRMAGEDPEMIEVK
PGYTVGLLFNKDDEVEKVIINQKEKYPDALIIEVETADLEHEMKITGYEQGKEDELAGFTVSQTSFFIVDGEEVQIAPYN
RQFGSKPVWKRIKAIAAGPIMNFILAYVILVMLGFIQGVPSNQPELGKLTDNGRAAAAGLKEGDYIQSINGEKMMSWTDI
VTAVKENPGKKIDVAVKRDGKSFHISVTPEAVKDENKKTIGRFGSYAPTEKGALAAIAYGATSTVDVTKAILTNLSKLVT
GQFKLDMLSGPVGIYDMTDQVAKTGIINLFQFAAFLSINLGIVNLLPIPALDGGRLLFLFIEAIRGKPINRDKEAFVVFI
GVAFLMLLMLVVTWNDIQRLFL

Nucleotide


Download         Length: 1269 bp        

>NTDB_id=449990 I5367_RS08285 WP_015417482.1 1634130..1635398(+) (eeP) [Bacillus amyloliquefaciens strain DGL1]
ATGTTCGTGAATACAGTTATCGCGTTTATTATTATTTTCGGAACGCTCGTTTTTTTCCATGAGCTCGGGCATTTATTGCT
CGCCCAAAGAGCGGGAATCCTTTGCCGTGAATTTGCGATCGGCTTCGGCCCTAAAATCTTTTCATTTAAAAAGAATGAAA
CCGTGTATACGATCAGACTCCTTCCGGTCGGCGGGTTCGTCCGCATGGCCGGTGAAGACCCGGAGATGATCGAAGTCAAA
CCCGGTTATACCGTCGGGCTTCTTTTTAATAAAGATGACGAAGTGGAAAAAGTCATCATTAATCAAAAGGAAAAATATCC
CGACGCTTTAATTATTGAGGTGGAGACGGCTGATCTTGAGCACGAAATGAAGATTACCGGGTACGAGCAGGGGAAAGAAG
ATGAACTGGCGGGCTTTACTGTCAGTCAGACCTCCTTTTTTATCGTAGACGGAGAAGAAGTGCAGATTGCGCCTTACAAT
CGACAATTCGGGTCTAAACCCGTATGGAAGCGGATTAAGGCGATTGCTGCCGGTCCGATAATGAACTTCATCTTAGCGTA
TGTCATTCTCGTCATGCTCGGATTCATTCAAGGCGTGCCTTCGAATCAGCCTGAGCTCGGGAAGCTGACAGACAATGGAC
GCGCAGCGGCTGCCGGTTTAAAAGAAGGCGACTATATCCAGAGCATTAACGGTGAAAAAATGATGTCATGGACCGACATC
GTGACAGCGGTAAAAGAAAATCCCGGAAAAAAAATCGATGTCGCCGTCAAACGGGACGGCAAATCGTTTCATATCTCGGT
TACACCTGAAGCTGTAAAAGATGAAAATAAAAAAACAATCGGCCGCTTCGGCTCTTATGCGCCGACTGAAAAAGGCGCGC
TTGCAGCGATTGCCTATGGCGCGACATCTACCGTTGATGTCACAAAAGCGATTCTGACCAATCTGAGCAAACTTGTGACA
GGCCAGTTTAAGCTTGATATGCTTTCGGGTCCTGTCGGCATTTATGATATGACGGATCAAGTTGCAAAAACCGGTATTAT
CAACCTATTCCAGTTTGCGGCGTTTTTAAGCATCAACCTGGGAATTGTCAACCTGCTGCCGATACCGGCGCTTGACGGCG
GGCGGCTGCTGTTTTTATTCATTGAAGCAATCCGCGGCAAGCCGATAAACCGTGACAAGGAAGCATTTGTCGTATTTATC
GGCGTAGCTTTCTTAATGCTTCTTATGCTGGTTGTCACATGGAACGATATCCAGCGTTTATTCTTATAA

Domains

Predicted by InterProScan.

Peptidase family M50 (Peptidase_M50)

(8-408)

PDZ domain (PDZ_6)

(212-258)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A7Z4S7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

39.535

100

0.403
  eeP Streptococcus thermophilus LMG 18311

39.671

100

0.4