Detailed information    

insolico Bioinformatically predicted

Overview

Name   pepF   Type   Regulator
Locus tag   FOC73_RS07530 Genome accession   NZ_CP053998
Coordinates   1545040..1546845 (+) Length   601 a.a.
NCBI ID   WP_002885594.1    Uniprot ID   -
Organism   Streptococcus salivarius strain FDAARGOS_771     
Function   degradation of XIP; competence shut-off (predicted from homology)   
Competence regulation

Genomic Context

Location: 1540040..1551845
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FOC73_RS07520 (FOC73_07520) - 1540832..1542769 (+) 1938 WP_002885509.1 GbpC/Spa domain-containing protein -
  FOC73_RS07525 (FOC73_07525) - 1544070..1545029 (+) 960 WP_002885592.1 competence protein CoiA -
  FOC73_RS07530 (FOC73_07530) pepF 1545040..1546845 (+) 1806 WP_002885594.1 oligoendopeptidase F Regulator
  FOC73_RS07535 (FOC73_07535) - 1547058..1548278 (+) 1221 WP_002885504.1 OFA family MFS transporter -
  FOC73_RS07540 (FOC73_07540) - 1548350..1549057 (+) 708 WP_037605419.1 O-methyltransferase -
  FOC73_RS07545 (FOC73_07545) - 1549119..1550261 (+) 1143 WP_002885515.1 peptidyl-prolyl cis-trans isomerase -
  FOC73_RS07550 (FOC73_07550) - 1550599..1551084 (+) 486 WP_002885497.1 LURP-one-related family protein -

Sequence

Protein


Download         Length: 601 a.a.        Molecular weight: 69070.10 Da        Isoelectric Point: 4.5615

>NTDB_id=449969 FOC73_RS07530 WP_002885594.1 1545040..1546845(+) (pepF) [Streptococcus salivarius strain FDAARGOS_771]
MSDNRTHLEEKYTWDLTTIFATDADWETEYESTVQDLKKASAYAGHLLDSAKNLLEATELYMSLMRRLEKIYVYASMKND
QDTTVGLYQEYQAKASNLYSQLSEAFAYFEPEFMALDDKKLAEFKEQEPGLGLYDHYFERLLANKDHVLSQEAEELLAAA
GDIFNGPTDTFNVLDNADILFPWVSDGQGDVVELTHGNFITLMESKDRDIRKGAYEAMYGTYEQFQHTYAQTLQGVVKVH
NYQAKVRHYNSARHAALAANFIPESVYDSLLESVNKHLPLLHRYLDLRKKVLGLDELKMYDVYTPLSETETALTYEESLK
KAEEVLAIFGEEYSKGVHAAFTERWIDVHPNKGKRSGAYSGGAYDTNAFMLLNWQDTLDNLFTLVHETGHSLHSTFTRQT
QPYVYGDYPIFLAEIASTTNENILTETLLKEVKDDKTRFAILNHYLDGFKGTVFRQTQFAEFEHAIHEADASGQILTADF
MNKLYADLNEKYYNLKAEDNYEIQFEWERIPHFYMNYYVYQYATGFAAASYLAEKIVHGTEEDKEAYLTYLKAGSSDYPL
EVIKKAGVDMTNTDYLDAAFKVFEDRLVELEALVEKGVHLS

Nucleotide


Download         Length: 1806 bp        

>NTDB_id=449969 FOC73_RS07530 WP_002885594.1 1545040..1546845(+) (pepF) [Streptococcus salivarius strain FDAARGOS_771]
ATGTCAGACAATCGTACTCATTTAGAAGAAAAATACACATGGGATTTGACGACCATTTTTGCGACAGATGCAGATTGGGA
AACCGAATATGAAAGCACTGTTCAGGATTTGAAGAAGGCTAGTGCTTATGCAGGTCATCTCTTAGATTCTGCTAAGAACT
TGCTTGAGGCAACAGAACTTTATATGAGCCTTATGCGTCGCTTGGAGAAAATCTATGTCTATGCGTCAATGAAAAATGAC
CAAGACACAACAGTAGGTCTGTATCAAGAGTACCAAGCAAAGGCCTCAAACCTTTATTCACAGTTGAGTGAAGCCTTTGC
TTACTTTGAGCCTGAATTTATGGCCTTGGATGATAAGAAATTAGCTGAATTTAAAGAACAAGAGCCAGGTCTTGGACTTT
ATGACCACTATTTCGAACGTCTTTTGGCCAACAAGGATCACGTTCTTTCTCAAGAAGCTGAAGAACTCTTGGCAGCAGCC
GGTGATATTTTCAACGGTCCAACGGATACCTTTAATGTCTTGGATAATGCTGATATCCTCTTCCCATGGGTATCAGATGG
CCAAGGGGATGTAGTTGAGTTGACACATGGTAACTTTATCACCCTCATGGAATCTAAGGACCGTGACATTCGTAAGGGTG
CTTATGAAGCGATGTACGGTACTTACGAGCAGTTCCAACATACCTATGCACAAACACTTCAAGGCGTTGTTAAGGTTCAC
AATTACCAAGCCAAAGTTCGTCACTATAATTCGGCACGTCATGCAGCACTTGCGGCTAATTTTATTCCAGAGAGTGTTTA
TGACTCACTCTTGGAATCAGTGAATAAGCATTTGCCACTTTTGCACCGTTACCTTGATTTGCGTAAGAAGGTCTTGGGGC
TTGACGAGCTTAAGATGTATGACGTCTACACACCACTTTCTGAGACTGAAACTGCTCTTACTTATGAAGAGTCCCTCAAG
AAAGCAGAGGAAGTCTTGGCAATCTTTGGTGAAGAGTATAGTAAAGGGGTTCATGCAGCCTTTACGGAACGTTGGATTGA
CGTTCACCCTAACAAAGGAAAACGCTCAGGTGCCTACTCAGGTGGTGCCTATGATACCAATGCTTTCATGCTTTTGAACT
GGCAAGACACTCTGGACAATCTCTTTACCTTGGTTCACGAGACTGGCCACAGCTTGCATTCAACGTTCACACGTCAGACA
CAACCATATGTTTATGGAGATTACCCAATCTTCTTGGCGGAAATTGCGTCTACAACTAATGAAAATATCTTGACAGAAAC
ACTGCTTAAAGAAGTTAAAGATGACAAGACACGTTTTGCTATCCTTAACCACTATTTGGATGGTTTCAAGGGAACTGTCT
TCCGTCAAACCCAATTTGCTGAGTTTGAGCATGCTATCCATGAAGCAGATGCATCTGGTCAAATCTTGACAGCCGACTTC
ATGAATAAACTTTACGCAGACCTCAATGAGAAATACTATAACCTTAAAGCTGAAGATAACTACGAAATTCAGTTTGAGTG
GGAACGTATTCCGCATTTCTATATGAATTACTATGTCTACCAATACGCTACAGGGTTTGCAGCAGCAAGCTACTTGGCTG
AAAAAATTGTTCACGGTACTGAGGAGGATAAAGAAGCTTACCTTACTTACCTTAAGGCGGGAAGCTCAGATTATCCTTTG
GAAGTTATCAAGAAAGCTGGTGTTGATATGACCAATACCGACTACTTGGATGCTGCCTTCAAAGTTTTTGAAGACCGTCT
CGTTGAATTGGAAGCCTTGGTTGAAAAAGGTGTTCACCTTTCTTAA

Domains

Predicted by InterproScan.

Peptidase family M3 (Peptidase_M3)

(202-581)

Oligopeptidase F (Peptidase_M3_N)

(112-181)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pepF Streptococcus salivarius strain HSISS4

99.834

100

0.998