NTDB

Overview

Name	clpP	Type	Regulator
Locus tag	FOC73_RS07055	Genome accession	NZ_CP053998
Coordinates	1452451..1453041 (+)	Length	196 a.a.
NCBI ID	WP_002883818.1	Uniprot ID	A0AB33ZFD4
Organism	Streptococcus salivarius strain FDAARGOS_771
Function	degradation of ComX (predicted from homology) Competence regulation

Genomic Context

Location: 1447451..1458041

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FOC73_RS07045 (FOC73_07045)	-	1448643..1451558 (+)	2916	WP_002883797.1	glycoside hydrolase family 68 protein	-
FOC73_RS07050 (FOC73_07050)	upp	1451648..1452277 (+)	630	WP_002883819.1	uracil phosphoribosyltransferase	-
FOC73_RS07055 (FOC73_07055)	clpP	1452451..1453041 (+)	591	WP_002883818.1	ATP-dependent Clp protease proteolytic subunit	Regulator
FOC73_RS07060 (FOC73_07060)	-	1453127..1453576 (+)	450	WP_002883748.1	YlbF family regulator	-
FOC73_RS07065 (FOC73_07065)	-	1453569..1453850 (+)	282	WP_002883763.1	DUF2129 domain-containing protein	-
FOC73_RS07070 (FOC73_07070)	-	1454005..1455180 (+)	1176	WP_002883756.1	ABC transporter substrate-binding protein	-
FOC73_RS07075 (FOC73_07075)	-	1455224..1456108 (+)	885	WP_002883743.1	branched-chain amino acid ABC transporter permease	-
FOC73_RS07080 (FOC73_07080)	-	1456112..1457062 (+)	951	WP_002883720.1	branched-chain amino acid ABC transporter permease	-
FOC73_RS07085 (FOC73_07085)	-	1457065..1457829 (+)	765	WP_002883723.1	ABC transporter ATP-binding protein	-

Sequence

Protein

Download Length: 196 a.a. Molecular weight: 21533.57 Da Isoelectric Point: 4.4829

                                >NTDB_id=449964 FOC73_RS07055 WP_002883818.1 1452451..1453041(+) (clpP) [Streptococcus salivarius strain FDAARGOS_771]

MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSIIAQLLFLDAQDNTKDIYLYVNTPGGSVSAGLAIVDTMN

FIKSDVQTIVMGMAASMGTIIASSGTKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRNNLEQILADNSGQ

PIEKVHVDAERDNWMSAQETLEYGFIDEIMANNQLK

Nucleotide

Download Length: 591 bp

                                >NTDB_id=449964 FOC73_RS07055 WP_002883818.1 1452451..1453041(+) (clpP) [Streptococcus salivarius strain FDAARGOS_771]

ATGATTCCTGTAGTAATTGAACAAACATCACGCGGTGAGCGTTCTTACGATATTTACTCACGTTTGCTCAAGGATCGTAT

CATCATGTTAACAGGTCCTGTTGAAGATAATATGGCAAACTCAATTATCGCCCAACTCTTGTTCTTGGATGCTCAAGACA

ATACAAAAGATATCTATCTTTATGTTAATACACCAGGTGGATCCGTTTCGGCAGGTCTTGCCATTGTTGATACAATGAAC

TTCATCAAGTCTGATGTTCAGACTATCGTTATGGGGATGGCAGCATCTATGGGAACAATTATCGCTTCAAGCGGTACCAA

AGGTAAACGTTTCATGTTGCCAAATGCAGAGTACATGATTCACCAACCAATGGGTGGTACTGGTGGCGGTACGCAACAAA

CAGACATGGCTATCGCAGCTGAACACTTGCTCAAGACACGTAATAACTTGGAGCAAATCTTGGCAGATAATTCTGGACAA

CCAATTGAAAAAGTTCATGTAGACGCTGAACGTGACAATTGGATGAGTGCTCAAGAAACGCTTGAATATGGTTTTATCGA

TGAAATCATGGCTAATAACCAATTAAAATAA

Domains

Predicted by InterproScan.

Clp protease (CLP_protease)

(11-192)

Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.

3D structure

Source	ID	Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.

Visualization of predicted probability:

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	H_a-value
clpP	Streptococcus thermophilus LMG 18311	98.98	100	0.99
clpP	Streptococcus thermophilus LMD-9	98.98	100	0.99
clpP	Streptococcus pneumoniae Rx1	93.846	99.49	0.934
clpP	Streptococcus pneumoniae D39	93.846	99.49	0.934
clpP	Streptococcus pneumoniae R6	93.846	99.49	0.934
clpP	Streptococcus pneumoniae TIGR4	93.846	99.49	0.934
clpP	Streptococcus pyogenes JRS4	90.306	100	0.903
clpP	Streptococcus pyogenes MGAS315	90.306	100	0.903
clpP	Streptococcus mutans UA159	88.265	100	0.883
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	87.755	100	0.878
clpP	Lactococcus lactis subsp. cremoris KW2	87.245	100	0.872
clpP	Bacillus subtilis subsp. subtilis str. 168	58.163	100	0.582
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	58.031	98.469	0.571

Detailed information NTG0449964