Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   FOC73_RS05410 Genome accession   NZ_CP053998
Coordinates   1128151..1128918 (+) Length   255 a.a.
NCBI ID   WP_002883980.1    Uniprot ID   -
Organism   Streptococcus salivarius strain FDAARGOS_771     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1123151..1133918
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FOC73_RS05395 (FOC73_05395) - 1125465..1126148 (-) 684 WP_002883977.1 YoaK family protein -
  FOC73_RS05400 (FOC73_05400) rlmH 1126164..1126643 (-) 480 WP_022495861.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  FOC73_RS05405 (FOC73_05405) htrA 1126849..1128084 (+) 1236 WP_002883958.1 trypsin-like peptidase domain-containing protein Regulator
  FOC73_RS05410 (FOC73_05410) spo0J 1128151..1128918 (+) 768 WP_002883980.1 ParB/RepB/Spo0J family partition protein Regulator
  FOC73_RS05415 (FOC73_05415) dnaA 1129157..1130521 (+) 1365 WP_002883970.1 chromosomal replication initiator protein DnaA -
  FOC73_RS05420 (FOC73_05420) dnaN 1130676..1131812 (+) 1137 WP_002883965.1 DNA polymerase III subunit beta -
  FOC73_RS05425 (FOC73_05425) - 1131864..1132055 (+) 192 WP_002883961.1 DUF951 domain-containing protein -
  FOC73_RS05430 (FOC73_05430) ychF 1132265..1133380 (+) 1116 WP_002883967.1 redox-regulated ATPase YchF -

Sequence

Protein


Download         Length: 255 a.a.        Molecular weight: 29361.89 Da        Isoelectric Point: 9.8469

>NTDB_id=449948 FOC73_RS05410 WP_002883980.1 1128151..1128918(+) (spo0J) [Streptococcus salivarius strain FDAARGOS_771]
MQEQLKALPISDIYPNPFQPRIEFSDEELAELSQSIAENGLIQPIIVRKSDIIGYELIAGERRLRACKRLGMTEIPAVVK
KVTDQESRKQAIIENLQRSNLNPIEEAKAYRSLINELAYSHEQLAKAMGKSRPYISNALRLLQLPQEIQTSIENGKLSQG
HARALLAVEDTKKQLTIYHQVLTEKWSVRTLEKRLQELPKKQKSKKDIHIKDKEKELEKSLGLPVTLRYHKNHSGTIQIH
FSTEEDFNRIINKLI

Nucleotide


Download         Length: 768 bp        

>NTDB_id=449948 FOC73_RS05410 WP_002883980.1 1128151..1128918(+) (spo0J) [Streptococcus salivarius strain FDAARGOS_771]
ATGCAAGAACAACTCAAAGCTTTACCTATTAGTGACATCTATCCCAATCCTTTTCAACCTCGTATAGAGTTCTCTGATGA
AGAATTAGCGGAGCTAAGCCAATCGATTGCAGAAAATGGACTGATACAGCCAATCATTGTCCGAAAATCGGATATTATTG
GTTATGAACTAATTGCTGGGGAAAGACGTTTACGTGCCTGTAAACGTCTAGGAATGACAGAAATCCCTGCAGTTGTAAAG
AAAGTTACAGATCAAGAAAGCCGTAAACAAGCTATTATTGAAAATTTACAACGATCGAATCTCAATCCCATTGAAGAAGC
AAAGGCCTATCGTAGTTTAATTAATGAGCTAGCTTATAGTCACGAGCAACTGGCGAAAGCTATGGGGAAATCCAGACCTT
ATATCAGTAACGCTCTCAGACTCCTCCAACTTCCCCAAGAAATACAGACGAGTATCGAAAATGGCAAACTGAGTCAAGGA
CATGCTAGAGCACTTTTAGCTGTTGAGGATACAAAAAAGCAATTAACTATCTATCATCAGGTCCTTACTGAAAAATGGTC
AGTTCGTACCCTGGAAAAAAGACTTCAAGAACTTCCAAAAAAACAAAAATCAAAAAAAGATATTCATATAAAAGATAAAG
AAAAAGAACTTGAAAAATCACTTGGTCTCCCTGTTACTCTTCGTTATCACAAAAATCACTCTGGAACCATTCAGATCCAC
TTTTCGACGGAAGAAGATTTTAACAGAATTATCAACAAGCTTATTTGA

Domains

Predicted by InterproScan.

ParB/Sulfiredoxin domain (ParB_N)

(8-95)

HTH domain found in ParB protein (HTH_ParB)

(146-196)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

58.039

100

0.58