Detailed information    

insolico Bioinformatically predicted

Overview

Name   htrA   Type   Regulator
Locus tag   FOC73_RS05405 Genome accession   NZ_CP053998
Coordinates   1126849..1128084 (+) Length   411 a.a.
NCBI ID   WP_002883958.1    Uniprot ID   -
Organism   Streptococcus salivarius strain FDAARGOS_771     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1121849..1133084
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FOC73_RS05375 (FOC73_05375) - 1122322..1124916 (+) 2595 WP_002883954.1 YfhO family protein -
  FOC73_RS05395 (FOC73_05395) - 1125465..1126148 (-) 684 WP_002883977.1 YoaK family protein -
  FOC73_RS05400 (FOC73_05400) rlmH 1126164..1126643 (-) 480 WP_022495861.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  FOC73_RS05405 (FOC73_05405) htrA 1126849..1128084 (+) 1236 WP_002883958.1 trypsin-like peptidase domain-containing protein Regulator
  FOC73_RS05410 (FOC73_05410) spo0J 1128151..1128918 (+) 768 WP_002883980.1 ParB/RepB/Spo0J family partition protein Regulator
  FOC73_RS05415 (FOC73_05415) dnaA 1129157..1130521 (+) 1365 WP_002883970.1 chromosomal replication initiator protein DnaA -
  FOC73_RS05420 (FOC73_05420) dnaN 1130676..1131812 (+) 1137 WP_002883965.1 DNA polymerase III subunit beta -
  FOC73_RS05425 (FOC73_05425) - 1131864..1132055 (+) 192 WP_002883961.1 DUF951 domain-containing protein -

Sequence

Protein


Download         Length: 411 a.a.        Molecular weight: 42931.09 Da        Isoelectric Point: 4.6266

>NTDB_id=449947 FOC73_RS05405 WP_002883958.1 1126849..1128084(+) (htrA) [Streptococcus salivarius strain FDAARGOS_771]
MKKFNWKKIVAPIAMLVIGLLGGLLGAFILLTAAGVSFTNSTDTGVKTAKTVYNNTTDTTKAVKKVQNAVVSVINYQEGS
SSDSLNELYGRIFGGDDSSDSSQDKSKDSDGLQVAGEGSGVIYKKDGKEAYIVTNNHVVDGAKKLEIMLSDGSKITGELV
GKDTYSDLAVVKVSSDKIKTVAEFADSNSLTVGEKAIAIGSPLGTEYANSVTEGIVSSLSRTVTMQNDNGETVSTNAIQT
DAAINPGNSGGALVNIEGQVIGINSSKISSTSAVAGSAVEGMGFAIPSNDVVEIINQLEKDGKVTRPALGISMADLNSLS
SSATSKLDLPDDVKSGVVVGSVQKGMPADGKLQENDVITEIDGKEISSKTDIQTNLYSHSIGDTIKVTFYRGKEKKTEEL
KLTKSTEDLSD

Nucleotide


Download         Length: 1236 bp        

>NTDB_id=449947 FOC73_RS05405 WP_002883958.1 1126849..1128084(+) (htrA) [Streptococcus salivarius strain FDAARGOS_771]
GTGAAAAAATTTAACTGGAAAAAAATAGTAGCGCCAATTGCAATGCTTGTTATTGGCTTGCTAGGTGGTTTGCTAGGTGC
CTTTATCCTACTAACAGCAGCAGGGGTATCTTTTACCAATTCAACAGATACAGGTGTTAAAACAGCTAAGACCGTATACA
ATAATACAACAGATACAACTAAAGCTGTTAAGAAAGTACAAAATGCCGTTGTTTCTGTCATCAATTACCAAGAAGGGTCA
TCTTCAGATTCTCTAAATGAACTTTATGGCCGTATCTTTGGTGGAGATGATAGTTCTGACTCTAGCCAAGACAAATCAAA
AGATTCTGATGGGTTACAAGTCGCTGGTGAAGGTTCCGGTGTTATCTATAAAAAGGATGGTAAAGAGGCTTATATCGTAA
CCAACAACCACGTTGTCGATGGCGCTAAAAAACTTGAAATCATGCTTTCAGATGGATCAAAAATTACTGGTGAACTCGTT
GGTAAAGATACTTACTCTGACCTAGCAGTTGTCAAAGTTTCTTCAGATAAAATTAAAACCGTAGCGGAATTTGCAGACTC
AAACTCTCTCACAGTCGGTGAGAAGGCAATTGCTATCGGTAGCCCACTTGGTACCGAATACGCCAACTCAGTAACAGAGG
GAATCGTTTCTAGCCTTAGCCGTACCGTAACTATGCAAAACGACAATGGTGAAACTGTTTCAACAAATGCTATCCAAACG
GATGCTGCCATTAACCCTGGTAACTCAGGTGGTGCCTTAGTCAATATCGAAGGACAAGTTATCGGTATTAACTCAAGTAA
AATTTCATCAACATCAGCAGTCGCTGGTAGCGCCGTTGAAGGTATGGGATTTGCCATTCCATCAAACGATGTTGTCGAGA
TTATCAATCAATTGGAAAAAGACGGTAAAGTTACACGACCAGCCCTAGGAATCTCAATGGCCGATCTTAATAGCCTTTCT
AGCAGTGCAACTTCTAAATTAGATTTACCAGATGATGTGAAATCTGGAGTGGTAGTCGGCAGCGTTCAAAAAGGTATGCC
AGCTGACGGTAAACTTCAAGAAAATGATGTTATCACTGAAATTGACGGTAAGGAAATCAGCTCAAAAACTGATATTCAAA
CCAATCTTTACAGCCATAGTATCGGAGATACAATCAAGGTAACCTTCTATCGTGGTAAAGAGAAGAAAACTGAAGAACTT
AAATTAACAAAATCTACAGAAGACTTGTCTGACTAA

Domains

Predicted by InterproScan.

PDZ domain (PDZ_2)

(307-402)

Trypsin-like peptidase domain (Trypsin_2)

(118-263)

Peptidase family M50 (Peptidase_M50)

(7-406)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mutans UA159

62.035

98.054

0.608
  htrA Streptococcus gordonii str. Challis substr. CH1

57.389

98.783

0.567
  htrA Streptococcus pneumoniae Rx1

54.523

99.513

0.543
  htrA Streptococcus pneumoniae R6

54.523

99.513

0.543
  htrA Streptococcus pneumoniae TIGR4

54.523

99.513

0.543
  htrA Streptococcus pneumoniae D39

54.523

99.513

0.543
  htrA Streptococcus mitis NCTC 12261

54.523

99.513

0.543