Detailed information NTG0449942

Bioinformatically predicted

Overview

• Name: comYD
• Type: Machinery gene
• Locus tag: FOC73_RS04705
• Genome accession: NZ_CP053998
• Coordinates: 990395..990823 (-)
• Length: 142 a.a.
• NCBI ID: WP_014632541.1
• Uniprot ID: -
• Organism: Streptococcus salivarius strain FDAARGOS_771
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 985395..995823

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FOC73_RS04665 (FOC73_04665)	-	985523..985969 (-)	447	WP_002885743.1	hypothetical protein	-
FOC73_RS04670 (FOC73_04670)	-	986047..986703 (-)	657	WP_002885876.1	CPBP family intramembrane glutamic endopeptidase	-
FOC73_RS04675 (FOC73_04675)	-	986715..986912 (-)	198	WP_002885716.1	helix-turn-helix transcriptional regulator	-
FOC73_RS04680 (FOC73_04680)	-	987163..988356 (-)	1194	WP_002885831.1	acetate kinase	-
FOC73_RS04685 (FOC73_04685)	comYH	988413..989369 (-)	957	WP_002885753.1	class I SAM-dependent methyltransferase	Machinery gene
FOC73_RS04690 (FOC73_04690)	comGG	989414..989731 (-)	318	WP_037605448.1	competence type IV pilus minor pilin ComGG	-
FOC73_RS04695 (FOC73_04695)	comYF	989709..990146 (-)	438	WP_002885762.1	competence type IV pilus minor pilin ComGF	Machinery gene
FOC73_RS04700 (FOC73_04700)	comGE	990133..990363 (-)	231	WP_002885825.1	competence type IV pilus minor pilin ComGE	-
FOC73_RS04705 (FOC73_04705)	comYD	990395..990823 (-)	429	WP_014632541.1	competence type IV pilus minor pilin ComGD	Machinery gene
FOC73_RS04710 (FOC73_04710)	comYC	990783..991097 (-)	315	WP_037611125.1	competence type IV pilus major pilin ComGC	Machinery gene
FOC73_RS04715 (FOC73_04715)	comYB	991106..992206 (-)	1101	WP_157747911.1	competence type IV pilus assembly protein ComGB	Machinery gene
FOC73_RS04720 (FOC73_04720)	comYA	992088..993029 (-)	942	WP_002885658.1	competence type IV pilus ATPase ComGA	Machinery gene
FOC73_RS04725 (FOC73_04725)	-	993109..993471 (-)	363	WP_002885749.1	DUF1033 family protein	-

Sequence

Protein

• Length: 142 a.a.
• Molecular weight: 15729.16 Da
• Isoelectric Point: 10.3019

>NTDB_id=449942 FOC73_RS04705 WP_014632541.1 990395..990823(-) (comYD) [Streptococcus salivarius strain FDAARGOS_771]
MRNMVAKAAQWPIRAFTLLESLVTLAVVAFLTLSLSGSVTGIFQQVETNLFYLRFEYLYRDSQRLAAAEGSNVELQLSKD
KISNGKSSLVIPKNIHLDKGQTLVFDAKGGNSSLTKIRFSSDKEVVTYQLNMGSGKYKKTVS

Nucleotide

• Length: 429 bp

>NTDB_id=449942 FOC73_RS04705 WP_014632541.1 990395..990823(-) (comYD) [Streptococcus salivarius strain FDAARGOS_771]
ATGCGAAACATGGTGGCGAAAGCCGCTCAGTGGCCAATTAGAGCCTTCACCTTGTTGGAGAGTCTGGTGACTCTAGCAGT
GGTTGCCTTTCTCACTCTGAGTTTATCAGGCTCAGTCACAGGTATTTTTCAGCAGGTTGAGACTAATCTTTTTTATCTGC
GCTTTGAGTACCTATACCGAGATAGTCAGCGCTTGGCAGCGGCGGAAGGGTCCAATGTTGAATTGCAGTTGTCCAAGGAT
AAAATCAGTAACGGAAAATCAAGTCTGGTGATTCCTAAAAATATACATCTGGATAAGGGGCAGACGCTAGTGTTTGATGC
CAAAGGTGGCAACTCTAGCCTCACAAAGATTCGTTTTTCAAGTGATAAGGAGGTGGTGACCTATCAGCTTAACATGGGCA
GCGGTAAATATAAAAAGACGGTCTCTTAG

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comYD	Streptococcus mutans UA140	54.962	92.254	0.507
comYD	Streptococcus mutans UA159	54.962	92.254	0.507
comYD	Streptococcus gordonii str. Challis substr. CH1	42.857	98.592	0.423
comGD/cglD	Streptococcus pneumoniae Rx1	45.669	89.437	0.408
comGD/cglD	Streptococcus pneumoniae D39	45.669	89.437	0.408
comGD/cglD	Streptococcus pneumoniae R6	45.669	89.437	0.408
comGD/cglD	Streptococcus mitis NCTC 12261	45.669	89.437	0.408
comGD/cglD	Streptococcus mitis SK321	44.882	89.437	0.401
comGD/cglD	Streptococcus pneumoniae TIGR4	44.882	89.437	0.401
comGD	Lactococcus lactis subsp. cremoris KW2	41.667	92.958	0.387