Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   FOC73_RS03430 Genome accession   NZ_CP053998
Coordinates   747994..748725 (-) Length   243 a.a.
NCBI ID   WP_002884531.1    Uniprot ID   -
Organism   Streptococcus salivarius strain FDAARGOS_771     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 742994..753725
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FOC73_RS03405 (FOC73_03405) - 744063..745244 (+) 1182 WP_002884589.1 NAD(P)/FAD-dependent oxidoreductase -
  FOC73_RS03415 (FOC73_03415) trmB 745460..746101 (-) 642 WP_002884443.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  FOC73_RS03420 (FOC73_03420) ccrZ 746111..746902 (-) 792 WP_002884270.1 cell cycle regulator CcrZ -
  FOC73_RS03425 (FOC73_03425) pptB 746960..747997 (-) 1038 WP_002884555.1 ABC transporter permease Regulator
  FOC73_RS03430 (FOC73_03430) pptA 747994..748725 (-) 732 WP_002884531.1 ABC transporter ATP-binding protein Regulator
  FOC73_RS03435 (FOC73_03435) - 748790..749209 (+) 420 WP_002884364.1 HIT family protein -
  FOC73_RS03440 (FOC73_03440) - 749206..749505 (+) 300 WP_002884229.1 hypothetical protein -
  FOC73_RS03445 (FOC73_03445) - 749685..749852 (-) 168 WP_002884708.1 hypothetical protein -
  FOC73_RS03450 (FOC73_03450) - 749870..750334 (-) 465 WP_172855709.1 hypothetical protein -
  FOC73_RS03455 (FOC73_03455) - 750428..751036 (-) 609 WP_002884297.1 DUF4230 domain-containing protein -
  FOC73_RS09725 - 751054..751179 (-) 126 WP_002884447.1 hypothetical protein -
  FOC73_RS03460 (FOC73_03460) - 751615..753720 (-) 2106 WP_002884786.1 AAA family ATPase -

Sequence

Protein


Download         Length: 243 a.a.        Molecular weight: 26860.11 Da        Isoelectric Point: 4.4855

>NTDB_id=449931 FOC73_RS03430 WP_002884531.1 747994..748725(-) (pptA) [Streptococcus salivarius strain FDAARGOS_771]
MLKLEKVTGGYANIPVLKDVTFEVADGELVGLIGLNGAGKSTTINEIIGLLTPYGGQIAIDGLTIQQDSASYRQKIGYIP
ETPSLYEELTLREHLETVLMAYGLDVTEGMARADKYLKLFRLDEKLDWFPTQFSKGMKQKVMIICAFIVNPSLFIVDEPF
LGLDPLAISDLIELLAEEKAKGKAILMSTHVLDSAEKMCDRFVILHHGQVLAQGTLEELRQTFGDESASLNDIYMQLTKG
ELS

Nucleotide


Download         Length: 732 bp        

>NTDB_id=449931 FOC73_RS03430 WP_002884531.1 747994..748725(-) (pptA) [Streptococcus salivarius strain FDAARGOS_771]
ATGCTTAAATTAGAAAAGGTGACGGGTGGTTACGCTAATATTCCCGTCCTAAAAGATGTGACTTTTGAGGTGGCTGATGG
TGAATTGGTTGGTCTCATTGGTCTTAATGGTGCTGGGAAATCAACAACAATTAACGAGATTATTGGTCTCTTAACACCTT
ATGGGGGACAGATTGCCATTGATGGGTTAACTATTCAACAAGATTCAGCTAGCTATCGTCAGAAGATTGGCTATATTCCT
GAAACGCCAAGTCTCTATGAAGAGTTGACGCTTCGTGAACATTTGGAAACGGTGTTGATGGCCTATGGTCTTGATGTGAC
TGAGGGGATGGCACGTGCGGACAAGTACCTCAAACTCTTTCGCTTAGATGAAAAGTTAGATTGGTTCCCGACTCAGTTTT
CAAAGGGAATGAAGCAGAAGGTCATGATTATCTGTGCCTTTATTGTTAACCCCAGTCTTTTCATTGTTGATGAACCCTTC
TTGGGCTTGGACCCCTTGGCAATCTCAGACTTAATTGAGCTTTTGGCTGAAGAAAAAGCTAAGGGTAAGGCAATTCTCAT
GTCTACACACGTTTTGGATTCAGCTGAGAAGATGTGTGACCGCTTCGTGATTTTGCATCATGGACAGGTCTTGGCACAGG
GAACTCTTGAGGAGCTCCGTCAGACTTTTGGTGATGAGAGTGCTAGTCTTAACGATATCTACATGCAGCTAACTAAGGGA
GAATTGTCATGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

98.765

100

0.988
  pptA Streptococcus thermophilus LMD-9

97.119

100

0.971