Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   FOC73_RS00240 Genome accession   NZ_CP053998
Coordinates   51475..52287 (+) Length   270 a.a.
NCBI ID   WP_002885031.1    Uniprot ID   -
Organism   Streptococcus salivarius strain FDAARGOS_771     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 46475..57287
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FOC73_RS00215 (FOC73_00215) - 46817..47515 (-) 699 WP_002886251.1 amino acid ABC transporter permease -
  FOC73_RS00220 (FOC73_00220) - 47533..48366 (-) 834 WP_172855705.1 transporter substrate-binding domain-containing protein -
  FOC73_RS00225 (FOC73_00225) - 48376..49143 (-) 768 WP_002885036.1 amino acid ABC transporter ATP-binding protein -
  FOC73_RS00230 (FOC73_00230) vicR 49429..50136 (+) 708 WP_002884978.1 response regulator YycF Regulator
  FOC73_RS00235 (FOC73_00235) vicK 50129..51469 (+) 1341 WP_002885062.1 cell wall metabolism sensor histidine kinase VicK Regulator
  FOC73_RS00240 (FOC73_00240) vicX 51475..52287 (+) 813 WP_002885031.1 MBL fold metallo-hydrolase Regulator
  FOC73_RS00245 (FOC73_00245) - 52346..52705 (+) 360 WP_002885010.1 YbaN family protein -
  FOC73_RS00250 (FOC73_00250) - 52757..53971 (-) 1215 WP_002885109.1 aminoacyltransferase -
  FOC73_RS00255 (FOC73_00255) yidA 53973..54782 (-) 810 WP_002885000.1 sugar-phosphatase -
  FOC73_RS00260 (FOC73_00260) - 54960..55826 (+) 867 WP_002885116.1 GNAT family N-acetyltransferase -
  FOC73_RS00265 (FOC73_00265) - 55908..56294 (+) 387 WP_002884910.1 DUF1934 domain-containing protein -

Sequence

Protein


Download         Length: 270 a.a.        Molecular weight: 30122.99 Da        Isoelectric Point: 5.3499

>NTDB_id=449915 FOC73_RS00240 WP_002885031.1 51475..52287(+) (vicX) [Streptococcus salivarius strain FDAARGOS_771]
MTSDLGFKYSILASGSTGNSFYLETPEKKILVDAGLSGKKITSLLAEIDRDPSDLDAILVTHEHKDHIHGVGVLARKYGM
DIYANEKTWQIMDSKNMLGKIDNTQKHVFSRDKLLTFGDIDIESFGVSHDAIDPQFYRFMKDGKSFVMLTDTGYVSDRMA
GIIENADGYLIESNHDVEILRAGSYPWSTKQRILSDQGHLCNEDGADAMIRTIGNKTKKIYLGHLSKENNIKELAHMTME
NQLARADFGVGTDFKVYDTSPDTATPLTDI

Nucleotide


Download         Length: 813 bp        

>NTDB_id=449915 FOC73_RS00240 WP_002885031.1 51475..52287(+) (vicX) [Streptococcus salivarius strain FDAARGOS_771]
ATGACCTCAGATTTAGGGTTTAAATATAGTATTTTGGCTTCAGGGTCAACTGGTAATTCCTTTTATTTGGAAACTCCAGA
GAAGAAGATTCTTGTAGATGCTGGTTTGTCTGGTAAGAAAATCACAAGTTTGCTAGCTGAGATTGATCGTGATCCGAGCG
ATTTGGATGCTATCTTAGTTACGCATGAACACAAGGATCACATCCATGGTGTAGGCGTTTTAGCTCGTAAATATGGCATG
GATATCTACGCCAACGAGAAAACCTGGCAGATTATGGATAGTAAAAATATGCTTGGCAAGATTGATAATACCCAGAAACA
TGTTTTTTCTCGTGATAAGCTTCTGACCTTTGGAGACATTGATATTGAGTCTTTTGGAGTTAGTCACGATGCTATTGATC
CACAGTTCTATCGCTTTATGAAAGATGGAAAGAGTTTTGTCATGTTGACGGATACGGGTTATGTTTCTGATCGTATGGCA
GGTATTATTGAGAATGCCGATGGCTATCTGATTGAGTCCAATCATGATGTTGAAATCCTTAGGGCAGGTTCATATCCTTG
GTCAACCAAGCAACGTATCCTCTCTGATCAAGGTCACTTGTGTAATGAAGATGGAGCGGATGCTATGATTCGTACCATTG
GTAATAAAACTAAAAAGATCTACTTGGGTCACCTTTCCAAAGAAAATAATATCAAGGAGTTGGCCCACATGACGATGGAA
AATCAGTTGGCACGTGCTGACTTTGGTGTTGGAACTGACTTTAAAGTTTATGATACCTCACCAGACACAGCGACTCCACT
GACAGACATTTAA

Domains

Predicted by InterproScan.

Beta-lactamase superfamily domain (Lactamase_B_2)

(29-214)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

76.866

99.259

0.763