Detailed information NTG0449832

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: STCNRZ1202_RS09295
• Genome accession: NZ_CP065506
• Coordinates: 1777117..1778217 (+)
• Length: 366 a.a.
• NCBI ID: WP_002947786.1
• Uniprot ID: Q5LXI7
• Organism: Streptococcus thermophilus strain CNRZ1202
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1772117..1783217

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
STCNRZ1202_RS09270 (STCNRZ1202_09275)	pgsA	1772659..1773201 (-)	543	WP_087010230.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
STCNRZ1202_RS09275 (STCNRZ1202_09280)	-	1773214..1774071 (-)	858	WP_002947779.1	helix-turn-helix domain-containing protein	-
STCNRZ1202_RS09280 (STCNRZ1202_09285)	-	1774130..1775407 (-)	1278	WP_347229634.1	pitrilysin family protein	-
STCNRZ1202_RS09285 (STCNRZ1202_09290)	-	1775409..1776659 (-)	1251	WP_347229635.1	pitrilysin family protein	-
STCNRZ1202_RS09290 (STCNRZ1202_09295)	yaaA	1776737..1777114 (+)	378	WP_347229636.1	S4 domain-containing protein YaaA	-
STCNRZ1202_RS09295 (STCNRZ1202_09300)	recF	1777117..1778217 (+)	1101	WP_002947786.1	DNA replication/repair protein RecF	Machinery gene
STCNRZ1202_RS09300 (STCNRZ1202_09305)	guaB	1778386..1779867 (-)	1482	WP_011227627.1	IMP dehydrogenase	-
STCNRZ1202_RS09305 (STCNRZ1202_09310)	trpS	1780044..1781066 (-)	1023	WP_002952292.1	tryptophan--tRNA ligase	-
STCNRZ1202_RS09310 (STCNRZ1202_09315)	-	1781494..1782366 (+)	873	WP_064355694.1	YitT family protein	-

Sequence

Protein

• Length: 366 a.a.
• Molecular weight: 42173.29 Da
• Isoelectric Point: 8.3913

>NTDB_id=449832 STCNRZ1202_RS09295 WP_002947786.1 1777117..1778217(+) (recF) [Streptococcus thermophilus strain CNRZ1202]
MWLEKIDIQHFRNYSEASVSFSPHLNIFLGRNAQGKTNILEAIYFLALTRSHRTHLDKELIQFQQNSLKLNGIVHRHSGN
LPLEINLSNKGRVTKVNYLKQAKLSDYIGHMTVVLFAPEDLQLVKGSPSLRRKFIDIDLGQIKPVYLSDLSNYNHVLKQR
NAYLKSTDKVDINFLSVLDEQLADFGARVIKHRLEFIKQLEEEADGHHSILSNQIERLKISYESNIPIQNSKDIREAFLT
TLNQNHKRDIFKKNTGVGPHRDDLKFYINDMNASFGSQGQQRSLILSLKMAEIALIKKVTEEFPILLLDDVMSELDNHRQ
LKLLESIDEEVQTFMTTTSLDHLSNLPPNLKTFLVKNGTIYEKQVD

Nucleotide

• Length: 1101 bp

>NTDB_id=449832 STCNRZ1202_RS09295 WP_002947786.1 1777117..1778217(+) (recF) [Streptococcus thermophilus strain CNRZ1202]
ATGTGGCTTGAAAAAATTGATATTCAACACTTTAGAAATTATTCTGAAGCCTCTGTGAGCTTTTCACCACATCTCAATAT
TTTTCTTGGACGAAATGCCCAAGGAAAAACAAATATTCTTGAAGCTATCTATTTTCTAGCCTTAACACGTAGTCATCGGA
CCCATTTAGACAAGGAACTAATTCAGTTCCAGCAAAATAGTCTTAAACTAAACGGCATCGTGCATCGTCATAGTGGAAAC
CTACCTCTAGAAATCAACTTATCTAATAAGGGACGAGTTACAAAGGTCAACTACCTCAAGCAGGCAAAATTATCTGATTA
TATAGGTCACATGACGGTGGTACTCTTTGCTCCTGAGGATTTACAACTTGTAAAAGGATCTCCAAGTCTAAGACGTAAAT
TTATAGATATTGATTTAGGACAGATTAAGCCTGTTTACCTCTCAGACCTATCAAATTACAATCATGTTCTTAAGCAGCGT
AATGCCTATCTCAAATCTACTGACAAGGTAGACATTAATTTCCTCTCAGTTTTAGATGAACAGCTTGCCGATTTTGGAGC
ACGAGTTATTAAACATAGACTAGAATTTATCAAGCAATTAGAAGAGGAAGCTGATGGACATCATAGTATTCTCTCAAATC
AGATTGAGCGTCTTAAAATTTCCTATGAATCTAACATCCCAATACAAAATAGCAAAGATATTCGAGAAGCATTTTTAACT
ACATTAAACCAGAATCACAAAAGAGATATCTTCAAAAAGAATACCGGTGTTGGTCCACATAGGGATGATTTAAAATTTTA
CATTAATGACATGAACGCATCTTTCGGTAGTCAAGGGCAGCAACGTAGCCTTATTCTTTCATTAAAAATGGCTGAGATTG
CTCTAATTAAAAAAGTGACAGAGGAATTTCCTATTCTTCTCCTTGACGATGTCATGAGTGAACTTGACAATCACCGTCAA
CTTAAATTGCTAGAAAGTATTGATGAAGAGGTCCAAACTTTCATGACTACAACCTCACTCGATCATCTTAGCAACCTACC
ACCCAATTTAAAGACCTTCTTAGTTAAGAATGGTACTATTTATGAAAAGCAAGTCGATTAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-358)

3D structure

• AlphaFold DB: Q5LXI7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	65.642	97.814	0.642
recF	Bacillus subtilis subsp. subtilis str. 168	42.935	100	0.432