Detailed information    

insolico Bioinformatically predicted

Overview

Name   comE/blpR   Type   Regulator
Locus tag   STCNRZ1202_RS07760 Genome accession   NZ_CP065506
Coordinates   1487306..1488037 (+) Length   243 a.a.
NCBI ID   WP_002948869.1    Uniprot ID   -
Organism   Streptococcus thermophilus strain CNRZ1202     
Function   activate transcription of early competence genes; regulation of comX expression (predicted from homology)   
Competence regulation

Genomic Context

Location: 1482306..1493037
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  STCNRZ1202_RS07740 (STCNRZ1202_07750) - 1483443..1484842 (+) 1400 Protein_1470 IS3-like element ISSth1b family transposase -
  STCNRZ1202_RS07745 (STCNRZ1202_07755) - 1484988..1485230 (-) 243 WP_096811635.1 Blp family class II bacteriocin -
  STCNRZ1202_RS07750 - 1485481..1485882 (-) 402 WP_011226490.1 hypothetical protein -
  STCNRZ1202_RS07755 (STCNRZ1202_07760) - 1486850..1487056 (-) 207 WP_084829836.1 bacteriocin class II family protein -
  STCNRZ1202_RS07760 (STCNRZ1202_07765) comE/blpR 1487306..1488037 (+) 732 WP_002948869.1 LytTR family DNA-binding domain-containing protein Regulator
  STCNRZ1202_RS07765 comD/blpH 1488574..1489377 (+) 804 WP_224103634.1 ATP-binding protein Regulator
  STCNRZ1202_RS07770 (STCNRZ1202_07775) - 1489395..1489556 (-) 162 WP_011226496.1 ComC/BlpC family leader-containing pheromone/bacteriocin -
  STCNRZ1202_RS07775 (STCNRZ1202_07780) comB 1489571..1490938 (-) 1368 WP_347229602.1 bacteriocin secretion accessory protein Regulator

Sequence

Protein


Download         Length: 243 a.a.        Molecular weight: 27803.11 Da        Isoelectric Point: 6.9136

>NTDB_id=449807 STCNRZ1202_RS07760 WP_002948869.1 1487306..1488037(+) (comE/blpR) [Streptococcus thermophilus strain CNRZ1202]
MKIYLLEDNSIQMGRLEEAVAHELKSFGKDLSCVQSFDKPDQLLSAITSNTSDQIFFLDIEIKGEDKKGLDIAKIIRQNN
PYAIIAFVTTHIEFMPQAFGVTAYKYINKTLDEASFRKEIGETIAQVFPINATTTDEFFLYKTESQLINLPMDQILYLST
SDIKHHVHLQTIHTLMDIRANLADFKKIHKKLYPCHRSYIVNTDMIISVNKTNYEATLINGQVLPVSRMKIGKIAQIVEE
RGR

Nucleotide


Download         Length: 732 bp        

>NTDB_id=449807 STCNRZ1202_RS07760 WP_002948869.1 1487306..1488037(+) (comE/blpR) [Streptococcus thermophilus strain CNRZ1202]
TTGAAGATTTACCTATTAGAAGATAATTCTATTCAGATGGGTCGCTTGGAAGAGGCTGTGGCACATGAACTTAAATCCTT
CGGAAAAGATCTATCTTGTGTCCAGTCTTTTGACAAACCTGACCAGTTGTTATCAGCTATCACTTCTAATACAAGCGATC
AGATTTTCTTTCTTGATATTGAAATTAAAGGTGAAGATAAGAAGGGACTTGATATCGCTAAAATCATACGTCAAAATAAC
CCTTATGCTATCATTGCCTTTGTCACTACACATATAGAGTTCATGCCTCAAGCTTTTGGCGTTACAGCCTATAAATACAT
CAATAAAACCTTAGATGAAGCTAGCTTTAGAAAAGAAATAGGGGAAACCATTGCTCAAGTCTTCCCTATTAACGCAACTA
CCACGGATGAGTTTTTTCTCTACAAAACAGAGTCTCAATTAATAAACCTTCCTATGGATCAAATTCTATACCTATCCACA
TCAGATATCAAACACCATGTTCACCTCCAGACTATCCATACCCTCATGGATATCCGAGCAAATCTGGCAGACTTTAAAAA
GATACACAAAAAGCTCTACCCATGCCATCGGTCCTATATCGTCAATACAGATATGATCATCTCTGTCAACAAGACCAATT
ATGAAGCTACCTTAATTAATGGTCAAGTTCTACCAGTATCCCGTATGAAGATAGGAAAGATTGCACAGATTGTTGAGGAA
AGAGGCAGATGA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(17-119)

LytTr DNA-binding domain (LytTR)

(146-237)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comE/blpR Streptococcus mutans UA159

35.628

100

0.362