Detailed information    

insolico Bioinformatically predicted

Overview

Name   comA/nlmT   Type   Regulator
Locus tag   STCNRZ1202_RS06060 Genome accession   NZ_CP065506
Coordinates   1150195..1150398 (-) Length   67 a.a.
NCBI ID   WP_224103626.1    Uniprot ID   -
Organism   Streptococcus thermophilus strain CNRZ1202     
Function   transport of ComC (predicted from homology)   
Competence regulation

Genomic Context

Location: 1145195..1155398
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  STCNRZ1202_RS06025 (STCNRZ1202_06055) - 1145869..1146447 (-) 579 Protein_1131 ABC transporter ATP-binding protein -
  STCNRZ1202_RS06030 (STCNRZ1202_06060) - 1146467..1147420 (-) 954 WP_041826943.1 IS30 family transposase -
  STCNRZ1202_RS06035 (STCNRZ1202_06065) - 1147675..1147995 (-) 321 Protein_1133 ATP-binding cassette domain-containing protein -
  STCNRZ1202_RS06040 (STCNRZ1202_06070) - 1147988..1148167 (-) 180 WP_263604415.1 hypothetical protein -
  STCNRZ1202_RS06045 (STCNRZ1202_06075) - 1148178..1148387 (-) 210 WP_300979612.1 hypothetical protein -
  STCNRZ1202_RS06050 (STCNRZ1202_06080) - 1148554..1149477 (-) 924 WP_263604416.1 bile acid:sodium symporter family protein -
  STCNRZ1202_RS06055 (STCNRZ1202_06085) - 1149622..1150071 (-) 450 WP_347229559.1 cytidine deaminase -
  STCNRZ1202_RS06060 comA/nlmT 1150195..1150398 (-) 204 WP_224103626.1 ABC transporter ATP-binding protein Regulator
  STCNRZ1202_RS06065 - 1150877..1151407 (+) 531 WP_224103625.1 hypothetical protein -
  STCNRZ1202_RS06070 (STCNRZ1202_06100) - 1151411..1151971 (+) 561 WP_173940410.1 hypothetical protein -
  STCNRZ1202_RS06075 (STCNRZ1202_06105) - 1152606..1153052 (-) 447 WP_173940411.1 GNAT family N-acetyltransferase -
  STCNRZ1202_RS06080 (STCNRZ1202_06110) - 1153067..1153795 (-) 729 Protein_1142 helicase-related protein -
  STCNRZ1202_RS06085 (STCNRZ1202_06115) - 1153890..1154330 (-) 441 WP_176243261.1 ASCH domain-containing protein -
  STCNRZ1202_RS06090 - 1154342..1154587 (-) 246 WP_224103624.1 hypothetical protein -

Sequence

Protein


Download         Length: 67 a.a.        Molecular weight: 7756.99 Da        Isoelectric Point: 4.1469

>NTDB_id=449785 STCNRZ1202_RS06060 WP_224103626.1 1150195..1150398(-) (comA/nlmT) [Streptococcus thermophilus strain CNRZ1202]
MARALLMKTDILFLDEFSSGIDLETLSKIENRLLQTSKLIIYITHVDTDRIIQQFDEIIDLNGFVDL

Nucleotide


Download         Length: 204 bp        

>NTDB_id=449785 STCNRZ1202_RS06060 WP_224103626.1 1150195..1150398(-) (comA/nlmT) [Streptococcus thermophilus strain CNRZ1202]
TTGGCAAGAGCCTTATTGATGAAGACGGATATCTTATTTTTAGACGAATTTTCTTCTGGTATTGACCTTGAAACGTTATC
AAAAATAGAGAATCGACTTTTACAAACGAGTAAATTAATTATTTACATCACACATGTAGACACCGATAGAATTATCCAAC
AATTTGATGAAATAATAGATTTGAATGGGTTTGTAGACTTATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comA/nlmT Streptococcus mutans UA159

45

89.552

0.403
  comA Streptococcus gordonii str. Challis substr. CH1

32.911

100

0.388