Detailed information    

insolico Bioinformatically predicted

Overview


Name   mecA   Type   Regulator
Locus tag   FOC89_RS19780 Genome accession   NZ_CP053980
Coordinates   3222398..3223081 (+) Length   227 a.a.
NCBI ID   WP_000350720.1    Uniprot ID   A0A0J1I2I3
Organism   Bacillus thuringiensis strain FDAARGOS_795     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context


Location: 3217398..3228081
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FOC89_RS19760 (FOC89_19755) - 3218480..3220126 (+) 1647 WP_000727257.1 peptide ABC transporter substrate-binding protein -
  FOC89_RS19765 (FOC89_19760) - 3220155..3220358 (-) 204 WP_000559980.1 hypothetical protein -
  FOC89_RS19770 (FOC89_19765) spx 3220952..3221347 (+) 396 WP_000258267.1 transcriptional regulator Spx -
  FOC89_RS19775 (FOC89_19770) - 3221397..3222071 (-) 675 WP_000362609.1 TerC family protein -
  FOC89_RS19780 (FOC89_19775) mecA 3222398..3223081 (+) 684 WP_000350720.1 adaptor protein MecA Regulator
  FOC89_RS19785 (FOC89_19780) - 3223154..3224698 (+) 1545 WP_000799201.1 cardiolipin synthase -
  FOC89_RS19790 (FOC89_19785) - 3224780..3226024 (+) 1245 WP_000612273.1 competence protein CoiA -
  FOC89_RS19795 (FOC89_19790) pepF 3226075..3227901 (+) 1827 WP_000003394.1 oligoendopeptidase F Regulator

Sequence


Protein


Download         Length: 227 a.a.        Molecular weight: 26994.06 Da        Isoelectric Point: 3.9822

>NTDB_id=449634 FOC89_RS19780 WP_000350720.1 3222398..3223081(+) (mecA) [Bacillus thuringiensis strain FDAARGOS_795]
MDIERINDHTMKFFITYIDIEDRGFNREEIWYDRERSEELFWEMMDEARDHDDFFIDGPLWIQVQAVDKGIEVLVTKAEL
SKDGQKLELPIGVDKIIDIPLDEGIESLFQQELVEEVEEQVGTNFNEDGTFGFLIKFNDFEDVISLSHRLIFEDIKDELY
SFEDRYYVYVEFDEVLHDEEEIDRILSIVLEYGEESTLTIHRVSEYGKQIVKEHALETIRNNFPAKT

Nucleotide


Download         Length: 684 bp        

>NTDB_id=449634 FOC89_RS19780 WP_000350720.1 3222398..3223081(+) (mecA) [Bacillus thuringiensis strain FDAARGOS_795]
TTGGATATTGAAAGAATTAATGATCATACGATGAAGTTTTTTATTACGTACATTGATATAGAGGACAGAGGCTTTAATCG
TGAGGAAATTTGGTATGACCGCGAAAGAAGCGAAGAGCTCTTTTGGGAAATGATGGACGAAGCTCGTGATCATGACGATT
TCTTTATTGATGGGCCGTTATGGATTCAAGTGCAAGCAGTCGATAAAGGGATTGAAGTACTTGTAACGAAAGCAGAACTT
TCAAAGGATGGACAAAAGCTAGAACTACCAATAGGTGTAGATAAAATTATAGACATTCCTCTAGATGAAGGCATTGAATC
ATTATTCCAGCAAGAATTAGTGGAAGAGGTAGAAGAACAAGTAGGAACAAACTTTAACGAAGATGGTACGTTTGGCTTTT
TAATTAAGTTTAATGATTTTGAAGATGTCATTTCATTAAGTCATCGTCTTATCTTTGAAGATATAAAAGATGAGCTGTAT
TCATTTGAGGACCGCTATTATGTATATGTGGAATTCGATGAAGTGCTACATGATGAGGAAGAAATTGATCGCATTTTAAG
TATTGTTTTAGAATACGGAGAAGAATCAACTTTAACAATTCATCGTGTAAGTGAGTATGGGAAACAAATTGTGAAAGAGC
ATGCGCTTGAAACAATTCGCAATAATTTTCCTGCTAAAACGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0J1I2I3

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

55.702

100

0.559