Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | FOC61_RS04080 | Genome accession | NZ_CP053957 |
| Coordinates | 848047..848442 (+) | Length | 131 a.a. |
| NCBI ID | WP_002435780.1 | Uniprot ID | A0A7Z7YUN8 |
| Organism | Staphylococcus capitis strain FDAARGOS_753 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 843047..853442
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FOC61_RS04050 (FOC61_04055) | atpD | 843265..844677 (+) | 1413 | WP_002435865.1 | F0F1 ATP synthase subunit beta | - |
| FOC61_RS04055 (FOC61_04060) | - | 844697..845101 (+) | 405 | WP_002453706.1 | F0F1 ATP synthase subunit epsilon | - |
| FOC61_RS04060 (FOC61_04065) | - | 845242..845475 (+) | 234 | WP_002453705.1 | DUF1146 family protein | - |
| FOC61_RS04065 (FOC61_04070) | murA | 845585..846850 (+) | 1266 | WP_002453704.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| FOC61_RS04070 (FOC61_04075) | fabZ | 846895..847332 (+) | 438 | WP_002435844.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| FOC61_RS04075 (FOC61_04080) | - | 847413..847856 (-) | 444 | WP_002453703.1 | YwpF-like family protein | - |
| FOC61_RS04080 (FOC61_04085) | ssb | 848047..848442 (+) | 396 | WP_002435780.1 | single-stranded DNA-binding protein | Machinery gene |
| FOC61_RS04085 (FOC61_04090) | - | 848837..849562 (+) | 726 | WP_002453702.1 | transglycosylase family protein | - |
| FOC61_RS04090 (FOC61_04095) | tenA | 849858..850553 (+) | 696 | WP_002453701.1 | thiaminase II | - |
| FOC61_RS04095 (FOC61_04100) | thiD | 850540..851361 (+) | 822 | WP_002453700.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| FOC61_RS04100 (FOC61_04105) | thiM | 851354..852142 (+) | 789 | WP_002453699.1 | hydroxyethylthiazole kinase | - |
| FOC61_RS04105 (FOC61_04110) | thiE | 852149..852787 (+) | 639 | WP_002453698.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15145.02 Da Isoelectric Point: 5.2691
>NTDB_id=449472 FOC61_RS04080 WP_002435780.1 848047..848442(+) (ssb) [Staphylococcus capitis strain FDAARGOS_753]
MLNKIVIVGRLTKDAQIYEKEDSKVATFCVATERNYKDENNEISSDYLLCKAFGKTATNIEKYTSQGTLVGITGQMRSRK
YEKEGQTHFVTELYVETIKFMSPKTKHNEILSQNQYDEDTYHSDDIEIINI
MLNKIVIVGRLTKDAQIYEKEDSKVATFCVATERNYKDENNEISSDYLLCKAFGKTATNIEKYTSQGTLVGITGQMRSRK
YEKEGQTHFVTELYVETIKFMSPKTKHNEILSQNQYDEDTYHSDDIEIINI
Nucleotide
Download Length: 396 bp
>NTDB_id=449472 FOC61_RS04080 WP_002435780.1 848047..848442(+) (ssb) [Staphylococcus capitis strain FDAARGOS_753]
ATGTTAAACAAAATAGTAATAGTAGGAAGGTTGACTAAAGATGCTCAAATTTATGAGAAGGAGGATAGTAAGGTCGCAAC
ATTTTGTGTAGCAACTGAAAGAAATTACAAAGATGAAAATAATGAAATATCAAGTGATTATTTATTGTGTAAAGCTTTCG
GCAAAACAGCAACCAATATCGAAAAATATACTAGTCAAGGTACATTAGTAGGTATAACAGGACAAATGCGTTCAAGAAAA
TATGAAAAAGAAGGACAAACGCATTTTGTAACCGAACTATATGTAGAAACAATTAAATTTATGTCTCCAAAAACTAAACA
TAATGAAATCCTCTCTCAAAATCAATACGATGAAGACACTTATCATTCAGACGACATTGAAATTATTAATATTTAA
ATGTTAAACAAAATAGTAATAGTAGGAAGGTTGACTAAAGATGCTCAAATTTATGAGAAGGAGGATAGTAAGGTCGCAAC
ATTTTGTGTAGCAACTGAAAGAAATTACAAAGATGAAAATAATGAAATATCAAGTGATTATTTATTGTGTAAAGCTTTCG
GCAAAACAGCAACCAATATCGAAAAATATACTAGTCAAGGTACATTAGTAGGTATAACAGGACAAATGCGTTCAAGAAAA
TATGAAAAAGAAGGACAAACGCATTTTGTAACCGAACTATATGTAGAAACAATTAAATTTATGTCTCCAAAAACTAAACA
TAATGAAATCCTCTCTCAAAATCAATACGATGAAGACACTTATCATTCAGACGACATTGAAATTATTAATATTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
76.336 |
100 |
0.763 |
| ssb | Staphylococcus aureus MW2 |
75.573 |
100 |
0.756 |