Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   ST4067_RS07660 Genome accession   NZ_CP065496
Coordinates   1469844..1470920 (-) Length   358 a.a.
NCBI ID   WP_204360114.1    Uniprot ID   -
Organism   Streptococcus thermophilus strain 4067     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 1464844..1475920
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ST4067_RS07640 (ST4067_07655) - 1465956..1468022 (-) 2067 WP_263604479.1 cation:proton antiporter -
  ST4067_RS07645 (ST4067_07660) - 1468031..1468273 (-) 243 WP_011226461.1 hypothetical protein -
  ST4067_RS07650 (ST4067_07665) - 1468270..1468818 (-) 549 WP_011226462.1 tRNA (mnm(5)s(2)U34)-methyltransferase -
  ST4067_RS07655 (ST4067_07670) - 1468815..1469759 (-) 945 WP_011226463.1 TIGR01212 family radical SAM protein -
  ST4067_RS07660 (ST4067_07675) sepM 1469844..1470920 (-) 1077 WP_204360114.1 SepM family pheromone-processing serine protease Regulator
  ST4067_RS07665 (ST4067_07680) coaD 1470898..1471395 (-) 498 WP_164178277.1 pantetheine-phosphate adenylyltransferase -
  ST4067_RS07670 (ST4067_07685) rsmD 1471429..1472028 (-) 600 Protein_1457 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  ST4067_RS07675 (ST4067_07690) trxB 1472119..1473072 (-) 954 WP_255136104.1 thioredoxin-disulfide reductase -
  ST4067_RS07680 (ST4067_07695) - 1473105..1473329 (-) 225 WP_002951743.1 DUF4059 family protein -
  ST4067_RS07685 (ST4067_07700) amiE 1473544..1474287 (-) 744 WP_164178279.1 amino acid ABC transporter ATP-binding protein Regulator
  ST4067_RS07690 (ST4067_07705) - 1474287..1475033 (-) 747 WP_095559509.1 amino acid ABC transporter permease -

Sequence


Protein


Download         Length: 358 a.a.        Molecular weight: 39230.10 Da        Isoelectric Point: 9.4989

>NTDB_id=449279 ST4067_RS07660 WP_204360114.1 1469844..1470920(-) (sepM) [Streptococcus thermophilus strain 4067]
MANKTKSKSLLEKMWRIKWWLLSIFTVLFLLFALFFPLNNYYVELPGGAFDTKEVLTVNKKADDSKGSYNFVAVAQTKAT
LALMLYAQFNDFAKLQTAEEATGNYSDEDFMRINQFYMETSQNQAVYQGLTLAGKEVSLEYMGVYVLQVADDSSFKGVLN
IADTVTAVNGKTFDNSTDMIKYVQGLKLGSKVRVTYMRDGKEKTATGKIIKIANGKNGIGIGLTDHTEIKSPENVKFKLD
GVGGPSAGLMFTLAIYDQVSGQDLKAGRKIAGTGTIEKDGAVGDIGGAYLKVKSAADSGADIFFVPNNLVTKEMKKADPD
AKTNYQEAKEAAEKLGTKMKIVPVKTAQEAIDYLKKTK

Nucleotide


Download         Length: 1077 bp        

>NTDB_id=449279 ST4067_RS07660 WP_204360114.1 1469844..1470920(-) (sepM) [Streptococcus thermophilus strain 4067]
GTGGCAAACAAGACAAAATCTAAATCGCTATTAGAGAAAATGTGGCGTATTAAGTGGTGGTTATTAAGTATTTTTACGGT
ACTTTTCCTCCTTTTTGCCCTCTTTTTCCCGCTCAATAATTACTATGTGGAGCTTCCGGGTGGTGCTTTTGATACCAAGG
AAGTCTTGACAGTGAATAAGAAAGCTGATGATTCTAAGGGCTCCTATAATTTTGTGGCGGTGGCTCAAACCAAGGCGACT
TTGGCCTTGATGCTCTATGCTCAGTTTAATGATTTTGCAAAGCTTCAAACGGCTGAAGAGGCAACTGGAAATTACTCTGA
TGAAGATTTCATGCGCATCAACCAATTTTACATGGAGACTTCTCAAAACCAAGCGGTTTATCAGGGCTTGACTCTGGCTG
GTAAGGAGGTTAGTTTGGAGTATATGGGTGTCTATGTGCTTCAGGTTGCTGATGATTCTAGCTTCAAGGGTGTCCTCAAT
ATTGCTGATACGGTGACGGCTGTTAATGGTAAGACCTTTGATAATTCTACTGACATGATTAAATACGTTCAAGGACTTAA
GCTGGGTTCAAAGGTCAGGGTCACTTATATGAGAGATGGCAAAGAAAAGACTGCTACTGGTAAGATTATTAAGATTGCCA
ATGGCAAAAATGGTATTGGTATCGGCCTAACGGACCATACTGAGATCAAGAGTCCTGAGAATGTTAAGTTTAAACTGGAT
GGTGTCGGTGGGCCAAGTGCTGGTCTTATGTTTACCTTGGCTATTTACGATCAGGTGTCTGGTCAAGACCTCAAGGCTGG
CCGCAAGATTGCTGGTACAGGAACTATTGAAAAAGATGGGGCTGTCGGTGATATCGGTGGGGCCTATCTCAAGGTGAAAT
CTGCGGCTGATAGTGGCGCAGACATTTTCTTCGTGCCAAATAATCTAGTAACTAAGGAAATGAAAAAGGCTGATCCGGAT
GCCAAGACTAATTATCAAGAGGCCAAGGAAGCTGCTGAGAAACTGGGGACCAAGATGAAAATCGTCCCTGTTAAAACAGC
TCAAGAAGCCATTGATTATTTGAAAAAGACTAAATGA

Domains


Predicted by InterProScan.

(137-206)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

63.05

95.251

0.601