Detailed information NTG0449202

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: STCNRZ385_RS09825
• Genome accession: NZ_CP065495
• Coordinates: 1883184..1884284 (+)
• Length: 366 a.a.
• NCBI ID: WP_002947786.1
• Uniprot ID: Q5LXI7
• Organism: Streptococcus thermophilus strain CNRZ385
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1878184..1889284

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
STCNRZ385_RS09800 (STCNRZ385_09825)	pgsA	1878724..1879266 (-)	543	WP_002947777.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
STCNRZ385_RS09805 (STCNRZ385_09830)	-	1879279..1880136 (-)	858	WP_014608803.1	helix-turn-helix transcriptional regulator	-
STCNRZ385_RS09810 (STCNRZ385_09835)	yfmH	1880195..1881472 (-)	1278	WP_011226704.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
STCNRZ385_RS09815 (STCNRZ385_09840)	yfmF	1881474..1882726 (-)	1253	Protein_1877	EF-P 5-aminopentanol modification-associated protein YfmF	-
STCNRZ385_RS09820 (STCNRZ385_09845)	yaaA	1882804..1883181 (+)	378	WP_002947785.1	S4 domain-containing protein YaaA	-
STCNRZ385_RS09825 (STCNRZ385_09850)	recF	1883184..1884284 (+)	1101	WP_002947786.1	DNA replication/repair protein RecF	Machinery gene
STCNRZ385_RS09830 (STCNRZ385_09855)	guaB	1884453..1885934 (-)	1482	WP_180483426.1	IMP dehydrogenase	-
STCNRZ385_RS09835 (STCNRZ385_09860)	trpS	1886111..1887133 (-)	1023	WP_002952292.1	tryptophan--tRNA ligase	-
STCNRZ385_RS09840 (STCNRZ385_09865)	-	1887561..1888433 (+)	873	WP_011227628.1	YitT family protein	-

Sequence

Protein

• Length: 366 a.a.
• Molecular weight: 42173.29 Da
• Isoelectric Point: 8.3913

>NTDB_id=449202 STCNRZ385_RS09825 WP_002947786.1 1883184..1884284(+) (recF) [Streptococcus thermophilus strain CNRZ385]
MWLEKIDIQHFRNYSEASVSFSPHLNIFLGRNAQGKTNILEAIYFLALTRSHRTHLDKELIQFQQNSLKLNGIVHRHSGN
LPLEINLSNKGRVTKVNYLKQAKLSDYIGHMTVVLFAPEDLQLVKGSPSLRRKFIDIDLGQIKPVYLSDLSNYNHVLKQR
NAYLKSTDKVDINFLSVLDEQLADFGARVIKHRLEFIKQLEEEADGHHSILSNQIERLKISYESNIPIQNSKDIREAFLT
TLNQNHKRDIFKKNTGVGPHRDDLKFYINDMNASFGSQGQQRSLILSLKMAEIALIKKVTEEFPILLLDDVMSELDNHRQ
LKLLESIDEEVQTFMTTTSLDHLSNLPPNLKTFLVKNGTIYEKQVD

Nucleotide

• Length: 1101 bp

>NTDB_id=449202 STCNRZ385_RS09825 WP_002947786.1 1883184..1884284(+) (recF) [Streptococcus thermophilus strain CNRZ385]
ATGTGGCTTGAAAAAATTGATATTCAACACTTTAGAAATTATTCTGAAGCCTCTGTGAGCTTTTCACCACATCTCAATAT
TTTTCTTGGACGAAATGCCCAAGGAAAAACAAATATTCTTGAAGCTATCTATTTTCTAGCCTTAACACGTAGTCATCGGA
CCCATTTAGACAAGGAACTAATTCAGTTCCAGCAAAATAGTCTTAAACTAAACGGCATCGTGCACCGTCATAGTGGAAAC
CTACCTCTGGAAATCAACTTATCTAATAAGGGACGAGTTACAAAGGTCAACTACCTCAAGCAGGCAAAATTATCTGATTA
TATAGGTCACATGACGGTGGTACTCTTTGCTCCTGAGGATTTACAACTTGTAAAAGGATCTCCAAGTCTAAGACGTAAAT
TTATAGATATTGATTTAGGACAGATTAAGCCTGTTTACCTCTCAGACCTATCAAATTACAATCATGTTCTTAAGCAGCGT
AATGCCTATCTCAAATCTACTGACAAGGTAGACATTAATTTCCTCTCAGTTTTAGATGAACAGCTTGCCGATTTTGGAGC
ACGAGTTATTAAACATAGACTAGAATTTATCAAGCAATTAGAAGAGGAAGCTGATGGACATCATAGTATTCTCTCAAATC
AGATTGAGCGTCTTAAAATTTCCTATGAATCTAACATCCCAATACAAAATAGCAAAGATATTCGAGAAGCATTTTTAACT
ACATTAAACCAGAATCACAAAAGAGATATCTTCAAAAAGAATACCGGTGTTGGTCCACATAGGGATGATTTAAAATTTTA
CATTAATGACATGAACGCATCTTTCGGTAGTCAAGGGCAGCAACGTAGCCTTATTCTTTCATTAAAAATGGCTGAGATTG
CTCTAATTAAAAAAGTGACGGAGGAATTTCCTATTCTTCTCCTTGACGATGTCATGAGTGAACTTGACAATCACCGTCAA
CTTAAATTGCTAGAAAGTATTGATGAAGAGGTCCAAACTTTCATGACTACAACCTCACTCGATCATCTTAGCAACCTACC
ACCCAATTTAAAGACCTTCTTAGTTAAGAATGGTACTATTTATGAAAAGCAAGTCGATTAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-358)

3D structure

• AlphaFold DB: Q5LXI7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	65.642	97.814	0.642
recF	Bacillus subtilis subsp. subtilis str. 168	42.935	100	0.432