Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   HQN50_RS02125 Genome accession   NZ_CP053922
Coordinates   460142..460549 (+) Length   135 a.a.
NCBI ID   WP_003084583.1    Uniprot ID   A0A0H2ZL28
Organism   Pseudomonas aeruginosa strain YD001     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 455142..465549
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HQN50_RS02095 - 455190..456194 (-) 1005 WP_003084569.1 aspartate carbamoyltransferase catalytic subunit -
  HQN50_RS02100 pyrR 456218..456730 (-) 513 WP_003084574.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  HQN50_RS02105 ruvX 456842..457276 (-) 435 WP_003084575.1 Holliday junction resolvase RuvX -
  HQN50_RS02110 - 457276..457845 (-) 570 WP_023088755.1 YqgE/AlgH family protein -
  HQN50_RS02115 - 457894..458787 (-) 894 WP_003084580.1 TonB family protein -
  HQN50_RS02120 gshB 458934..459887 (-) 954 WP_003100943.1 glutathione synthase -
  HQN50_RS02125 pilG 460142..460549 (+) 408 WP_003084583.1 twitching motility response regulator PilG Regulator
  HQN50_RS02130 pilH 460596..460961 (+) 366 WP_003084587.1 twitching motility response regulator PilH -
  HQN50_RS02135 - 461012..461548 (+) 537 WP_003084590.1 chemotaxis protein CheW -
  HQN50_RS02140 pilJ 461633..463681 (+) 2049 WP_003100940.1 chemotaxis chemoreceptor PilJ -
  HQN50_RS02145 pilK 463742..464617 (+) 876 WP_023088756.1 type 4 fimbrial methyltransferase PilK -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14718.11 Da        Isoelectric Point: 7.1340

>NTDB_id=448969 HQN50_RS02125 WP_003084583.1 460142..460549(+) (pilG) [Pseudomonas aeruginosa strain YD001]
MEQQSDGLKVMVIDDSKTIRRTAETLLKKVGCDVITAIDGFDALAKIADTHPNIIFVDIMMPRLDGYQTCALIKNNSAFK
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEELLGAIKAHVPSFTPVDAVS

Nucleotide


Download         Length: 408 bp        

>NTDB_id=448969 HQN50_RS02125 WP_003084583.1 460142..460549(+) (pilG) [Pseudomonas aeruginosa strain YD001]
ATGGAACAGCAATCCGACGGTTTGAAAGTGATGGTGATCGACGATTCGAAAACGATTCGTCGCACCGCCGAAACACTGCT
GAAAAAGGTCGGTTGCGACGTGATCACGGCAATCGACGGCTTCGATGCCCTGGCGAAGATCGCCGATACCCATCCGAACA
TCATTTTCGTCGACATCATGATGCCGCGCCTGGATGGCTATCAGACCTGCGCCCTGATCAAGAACAACAGCGCGTTCAAG
TCCACCCCGGTGATCATGCTGTCCTCCAAGGACGGCCTGTTCGACAAGGCCAAGGGGCGCATCGTCGGCTCCGACCAGTA
CCTCACCAAGCCGTTCAGCAAGGAAGAGCTGCTGGGCGCGATCAAGGCACACGTACCCAGCTTCACCCCGGTGGACGCCG
TTTCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2ZL28

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.803

94.074

0.704
  vicR Streptococcus mutans UA159

44.444

86.667

0.385