Detailed information NTG0448786

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: STCNRZ1575_RS09655
• Genome accession: NZ_CP065490
• Coordinates: 1840510..1841610 (+)
• Length: 366 a.a.
• NCBI ID: WP_002947786.1
• Uniprot ID: Q5LXI7
• Organism: Streptococcus thermophilus strain CNRZ1575
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1835510..1846610

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
STCNRZ1575_RS09630 (STCNRZ1575_09635)	pgsA	1836052..1836594 (-)	543	WP_084826205.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
STCNRZ1575_RS09635 (STCNRZ1575_09640)	-	1836607..1837464 (-)	858	WP_011681760.1	helix-turn-helix domain-containing protein	-
STCNRZ1575_RS09640 (STCNRZ1575_09645)	-	1837523..1838800 (-)	1278	WP_084830890.1	pitrilysin family protein	-
STCNRZ1575_RS09645 (STCNRZ1575_09650)	-	1838802..1840052 (-)	1251	WP_002952285.1	pitrilysin family protein	-
STCNRZ1575_RS09650 (STCNRZ1575_09655)	yaaA	1840130..1840507 (+)	378	WP_084826206.1	S4 domain-containing protein YaaA	-
STCNRZ1575_RS09655 (STCNRZ1575_09660)	recF	1840510..1841610 (+)	1101	WP_002947786.1	DNA replication/repair protein RecF	Machinery gene
STCNRZ1575_RS09660 (STCNRZ1575_09665)	guaB	1841779..1843260 (-)	1482	WP_011227627.1	IMP dehydrogenase	-
STCNRZ1575_RS09665 (STCNRZ1575_09670)	trpS	1843437..1844459 (-)	1023	WP_011681763.1	tryptophan--tRNA ligase	-
STCNRZ1575_RS09670 (STCNRZ1575_09675)	-	1844887..1845759 (+)	873	WP_064355694.1	YitT family protein	-

Sequence

Protein

• Length: 366 a.a.
• Molecular weight: 42173.29 Da
• Isoelectric Point: 8.3913

>NTDB_id=448786 STCNRZ1575_RS09655 WP_002947786.1 1840510..1841610(+) (recF) [Streptococcus thermophilus strain CNRZ1575]
MWLEKIDIQHFRNYSEASVSFSPHLNIFLGRNAQGKTNILEAIYFLALTRSHRTHLDKELIQFQQNSLKLNGIVHRHSGN
LPLEINLSNKGRVTKVNYLKQAKLSDYIGHMTVVLFAPEDLQLVKGSPSLRRKFIDIDLGQIKPVYLSDLSNYNHVLKQR
NAYLKSTDKVDINFLSVLDEQLADFGARVIKHRLEFIKQLEEEADGHHSILSNQIERLKISYESNIPIQNSKDIREAFLT
TLNQNHKRDIFKKNTGVGPHRDDLKFYINDMNASFGSQGQQRSLILSLKMAEIALIKKVTEEFPILLLDDVMSELDNHRQ
LKLLESIDEEVQTFMTTTSLDHLSNLPPNLKTFLVKNGTIYEKQVD

Nucleotide

• Length: 1101 bp

>NTDB_id=448786 STCNRZ1575_RS09655 WP_002947786.1 1840510..1841610(+) (recF) [Streptococcus thermophilus strain CNRZ1575]
ATGTGGCTTGAAAAAATTGATATTCAACACTTTAGAAATTATTCTGAAGCCTCTGTGAGCTTTTCACCACATCTCAATAT
TTTTCTTGGACGAAATGCCCAAGGAAAAACAAATATTCTTGAAGCTATCTATTTTCTAGCCTTAACACGTAGTCATCGGA
CCCATTTAGACAAGGAACTAATTCAGTTCCAGCAAAATAGTCTTAAACTAAACGGCATCGTGCATCGTCATAGTGGAAAC
CTACCTCTGGAAATCAACTTATCTAATAAGGGACGAGTTACAAAGGTCAACTACCTCAAGCAGGCAAAATTATCTGATTA
TATAGGTCACATGACGGTGGTACTCTTTGCTCCTGAGGATTTACAACTTGTAAAAGGATCTCCAAGTCTAAGACGTAAAT
TTATAGATATTGATTTAGGACAGATTAAGCCTGTTTACCTCTCAGACCTATCAAATTACAATCATGTTCTTAAGCAGCGT
AATGCCTATCTCAAATCTACTGACAAGGTAGACATTAATTTCCTCTCAGTTTTAGATGAACAGCTTGCCGATTTTGGAGC
ACGAGTTATTAAACATAGACTAGAATTTATCAAGCAATTAGAAGAGGAAGCTGATGGACATCATAGTATTCTCTCAAATC
AGATTGAGCGTCTTAAAATTTCCTATGAATCTAACATCCCAATACAAAATAGCAAAGATATTCGAGAAGCATTTTTAACT
ACATTAAACCAGAATCACAAAAGAGATATCTTCAAAAAGAATACCGGTGTTGGTCCACATAGGGATGATTTAAAATTTTA
CATTAATGACATGAACGCATCTTTCGGTAGTCAAGGGCAGCAACGTAGCCTTATTCTTTCATTAAAAATGGCTGAGATTG
CTCTAATTAAAAAAGTGACAGAGGAATTTCCTATTCTTCTCCTTGACGATGTCATGAGTGAACTTGACAATCACCGTCAA
CTTAAATTGCTAGAAAGTATTGATGAAGAGGTCCAAACTTTCATGACTACAACCTCACTCGATCATCTTAGCAACCTACC
ACCCAATTTAAAGACCTTCTTAGTTAAGAATGGTACTATTTATGAAAAGCAAGTCGATTAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-358)

3D structure

• AlphaFold DB: Q5LXI7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	65.642	97.814	0.642
recF	Bacillus subtilis subsp. subtilis str. 168	42.935	100	0.432