Detailed information NTG0448683

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: STCNRZ302_RS09605
• Genome accession: NZ_CP065489
• Coordinates: 1846168..1847268 (+)
• Length: 366 a.a.
• NCBI ID: WP_002947786.1
• Uniprot ID: Q5LXI7
• Organism: Streptococcus thermophilus strain CNRZ302
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1841168..1852268

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
STCNRZ302_RS09580 (STCNRZ302_09520)	pgsA	1841711..1842253 (-)	543	WP_002947777.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
STCNRZ302_RS09585 (STCNRZ302_09525)	-	1842266..1843123 (-)	858	WP_014608803.1	helix-turn-helix domain-containing protein	-
STCNRZ302_RS09590 (STCNRZ302_09530)	-	1843182..1844458 (-)	1277	Protein_1831	pitrilysin family protein	-
STCNRZ302_RS09595 (STCNRZ302_09535)	-	1844460..1845710 (-)	1251	Protein_1832	pitrilysin family protein	-
STCNRZ302_RS09600 (STCNRZ302_09540)	yaaA	1845788..1846165 (+)	378	WP_002947785.1	S4 domain-containing protein YaaA	-
STCNRZ302_RS09605 (STCNRZ302_09545)	recF	1846168..1847268 (+)	1101	WP_002947786.1	DNA replication/repair protein RecF	Machinery gene
STCNRZ302_RS09610 (STCNRZ302_09550)	guaB	1847437..1848918 (-)	1482	WP_014608806.1	IMP dehydrogenase	-
STCNRZ302_RS09615 (STCNRZ302_09555)	trpS	1849095..1850117 (-)	1023	WP_002952292.1	tryptophan--tRNA ligase	-
STCNRZ302_RS09620 (STCNRZ302_09560)	-	1850545..1851417 (+)	873	WP_011227628.1	YitT family protein	-

Sequence

Protein

• Length: 366 a.a.
• Molecular weight: 42173.29 Da
• Isoelectric Point: 8.3913

>NTDB_id=448683 STCNRZ302_RS09605 WP_002947786.1 1846168..1847268(+) (recF) [Streptococcus thermophilus strain CNRZ302]
MWLEKIDIQHFRNYSEASVSFSPHLNIFLGRNAQGKTNILEAIYFLALTRSHRTHLDKELIQFQQNSLKLNGIVHRHSGN
LPLEINLSNKGRVTKVNYLKQAKLSDYIGHMTVVLFAPEDLQLVKGSPSLRRKFIDIDLGQIKPVYLSDLSNYNHVLKQR
NAYLKSTDKVDINFLSVLDEQLADFGARVIKHRLEFIKQLEEEADGHHSILSNQIERLKISYESNIPIQNSKDIREAFLT
TLNQNHKRDIFKKNTGVGPHRDDLKFYINDMNASFGSQGQQRSLILSLKMAEIALIKKVTEEFPILLLDDVMSELDNHRQ
LKLLESIDEEVQTFMTTTSLDHLSNLPPNLKTFLVKNGTIYEKQVD

Nucleotide

• Length: 1101 bp

>NTDB_id=448683 STCNRZ302_RS09605 WP_002947786.1 1846168..1847268(+) (recF) [Streptococcus thermophilus strain CNRZ302]
ATGTGGCTTGAAAAAATTGATATTCAACACTTTAGAAATTATTCTGAAGCCTCTGTGAGCTTTTCACCACATCTCAATAT
TTTTCTTGGACGAAATGCCCAAGGAAAAACAAATATTCTTGAAGCTATCTATTTTCTAGCCTTAACACGTAGTCATCGGA
CCCATTTAGACAAGGAACTAATTCAGTTCCAGCAAAATAGTCTTAAACTAAACGGCATCGTGCACCGTCATAGTGGAAAC
CTACCTCTGGAAATCAACTTATCTAATAAGGGACGAGTTACAAAGGTCAACTACCTCAAGCAGGCAAAATTATCTGATTA
TATAGGTCACATGACGGTGGTACTCTTTGCTCCTGAGGATTTACAACTTGTAAAAGGATCTCCAAGTCTAAGACGTAAAT
TTATAGATATTGATTTAGGACAGATTAAGCCTGTTTACCTCTCAGACCTATCAAATTACAATCATGTTCTTAAGCAGCGT
AATGCCTATCTCAAATCTACTGACAAGGTAGACATTAATTTCCTCTCAGTTTTAGATGAACAGCTTGCCGATTTTGGAGC
ACGAGTTATTAAACATAGACTAGAATTTATCAAGCAATTAGAAGAGGAAGCTGATGGACATCATAGTATTCTCTCAAATC
AGATTGAGCGTCTTAAAATTTCCTATGAATCTAACATCCCAATACAAAATAGCAAAGATATTCGAGAAGCATTTTTAACT
ACATTAAACCAGAATCACAAAAGAGATATCTTCAAAAAGAATACCGGTGTTGGTCCACATAGGGATGATTTAAAATTTTA
CATTAATGACATGAACGCATCTTTCGGTAGTCAAGGGCAGCAACGTAGCCTTATTCTTTCATTAAAAATGGCTGAGATTG
CTCTAATTAAAAAAGTGACGGAGGAATTTCCTATTCTTCTCCTTGACGATGTCATGAGTGAACTTGACAATCACCGTCAA
CTTAAATTGCTAGAAAGTATTGATGAAGAGGTCCAAACTTTCATGACTACAACCTCACTCGATCATCTTAGCAACCTACC
ACCCAATTTAAAGACCTTCTTAGTTAAGAATGGTACTATTTATGAAAAGCAAGTCGATTAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-358)

3D structure

• AlphaFold DB: Q5LXI7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	65.642	97.814	0.642
recF	Bacillus subtilis subsp. subtilis str. 168	42.935	100	0.432