Detailed information NTG0448060

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: STCNRZ1151_RS09390
• Genome accession: NZ_CP065483
• Coordinates: 1780441..1781541 (+)
• Length: 366 a.a.
• NCBI ID: WP_002947786.1
• Uniprot ID: Q5LXI7
• Organism: Streptococcus thermophilus strain CNRZ1151
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1775441..1786541

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
STCNRZ1151_RS09365 (STCNRZ1151_09350)	pgsA	1775983..1776525 (-)	543	WP_011227624.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
STCNRZ1151_RS09370 (STCNRZ1151_09355)	-	1776538..1777395 (-)	858	WP_011226703.1	helix-turn-helix transcriptional regulator	-
STCNRZ1151_RS09375 (STCNRZ1151_09360)	yfmH	1777454..1778731 (-)	1278	WP_011227625.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
STCNRZ1151_RS09380 (STCNRZ1151_09365)	yfmF	1778733..1779983 (-)	1251	WP_011681762.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
STCNRZ1151_RS09385 (STCNRZ1151_09370)	yaaA	1780061..1780438 (+)	378	WP_002947785.1	S4 domain-containing protein YaaA	-
STCNRZ1151_RS09390 (STCNRZ1151_09375)	recF	1780441..1781541 (+)	1101	WP_002947786.1	DNA replication/repair protein RecF	Machinery gene
STCNRZ1151_RS09395 (STCNRZ1151_09380)	guaB	1781719..1783191 (-)	1473	WP_263611702.1	IMP dehydrogenase	-
STCNRZ1151_RS09400 (STCNRZ1151_09385)	trpS	1783368..1784390 (-)	1023	WP_002952292.1	tryptophan--tRNA ligase	-
STCNRZ1151_RS09405 (STCNRZ1151_09390)	-	1784818..1785690 (+)	873	WP_011227628.1	YitT family protein	-

Sequence

Protein

• Length: 366 a.a.
• Molecular weight: 42173.29 Da
• Isoelectric Point: 8.3913

>NTDB_id=448060 STCNRZ1151_RS09390 WP_002947786.1 1780441..1781541(+) (recF) [Streptococcus thermophilus strain CNRZ1151]
MWLEKIDIQHFRNYSEASVSFSPHLNIFLGRNAQGKTNILEAIYFLALTRSHRTHLDKELIQFQQNSLKLNGIVHRHSGN
LPLEINLSNKGRVTKVNYLKQAKLSDYIGHMTVVLFAPEDLQLVKGSPSLRRKFIDIDLGQIKPVYLSDLSNYNHVLKQR
NAYLKSTDKVDINFLSVLDEQLADFGARVIKHRLEFIKQLEEEADGHHSILSNQIERLKISYESNIPIQNSKDIREAFLT
TLNQNHKRDIFKKNTGVGPHRDDLKFYINDMNASFGSQGQQRSLILSLKMAEIALIKKVTEEFPILLLDDVMSELDNHRQ
LKLLESIDEEVQTFMTTTSLDHLSNLPPNLKTFLVKNGTIYEKQVD

Nucleotide

• Length: 1101 bp

>NTDB_id=448060 STCNRZ1151_RS09390 WP_002947786.1 1780441..1781541(+) (recF) [Streptococcus thermophilus strain CNRZ1151]
ATGTGGCTTGAAAAAATTGATATTCAACACTTTAGAAATTATTCTGAAGCCTCTGTGAGCTTTTCACCACATCTCAATAT
TTTTCTTGGACGAAATGCCCAAGGAAAAACAAATATTCTTGAAGCTATCTATTTTCTAGCCTTAACACGTAGTCATCGGA
CCCATTTAGACAAGGAACTAATTCAGTTCCAGCAAAATAGTCTTAAACTAAACGGCATCGTGCACCGTCATAGTGGAAAC
CTACCTCTGGAAATCAACTTATCTAATAAGGGACGAGTTACAAAGGTCAACTACCTCAAGCAGGCAAAATTATCTGATTA
TATAGGTCACATGACGGTGGTACTCTTTGCTCCTGAGGATTTACAACTTGTAAAAGGATCTCCAAGTCTAAGACGTAAAT
TTATAGATATTGATTTAGGACAGATTAAGCCTGTTTACCTCTCAGACCTATCAAATTACAATCATGTTCTTAAGCAGCGT
AATGCCTATCTCAAATCTACTGACAAGGTAGACATTAATTTCCTCTCAGTTTTAGATGAACAGCTTGCCGATTTTGGAGC
ACGAGTTATTAAACATAGACTAGAATTTATCAAGCAATTAGAAGAGGAAGCTGATGGACATCATAGTATTCTCTCAAATC
AGATTGAGCGTCTTAAAATTTCCTATGAATCTAACATCCCAATACAAAATAGCAAAGATATTCGAGAAGCATTTTTAACT
ACATTAAACCAGAATCACAAAAGAGATATCTTCAAAAAGAATACCGGTGTTGGTCCACATAGGGATGATTTAAAATTTTA
CATTAATGACATGAACGCATCTTTCGGTAGTCAAGGGCAGCAACGTAGCCTTATTCTTTCATTAAAAATGGCTGAGATTG
CTCTAATTAAAAAAGTGACGGAGGAATTTCCTATTCTTCTCCTTGACGATGTCATGAGTGAACTTGACAATCACCGTCAA
CTTAAATTGCTAGAAAGTATTGATGAAGAGGTCCAAACTTTCATGACTACAACCTCACTCGATCATCTTAGCAACCTACC
ACCCAATTTAAAGACCTTCTTAGTTAAGAATGGTACTATTTATGAAAAGCAAGTCGATTAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-358)

3D structure

• AlphaFold DB: Q5LXI7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	65.642	97.814	0.642
recF	Bacillus subtilis subsp. subtilis str. 168	42.935	100	0.432